|
Name : nrdF (LAR_0311) Accession : YP_001841307.1 Strain : Lactobacillus reuteri JCM 1112 Genome accession: NC_010609 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit beta Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0208 EC number : - Position : 368191 - 369210 bp Length : 1020 bp Strand : - Note : B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE DNA sequence : ATGAAACTGGAAGAATTTAAACCTGTAAATCAATATAAAGCAATCAATTGGAATGAAGTTTCCGACATGATCGATAAAGC TACCTGGGAAAAGCTAACAGAACAGTTCTGGCTTGATACACGAATTCCTGTTGCCAATGATATGGATGATTGGCGTGAAT TAGATGACGATCATCAATGGACTGTCGGACATGTTTTTGGTGGTTTAACCCTTCTTGATACTGTTCAATCAGAAGCAGGA TTAACTGCCCTTAAAGAAGATGTTAAAACTCCTCATGAAACAGCAGTTCTTAATAACATCCAATTTATGGAATCAGTTCA TGCTAAGAGTTACTCAACTATTTTCTCTACTCTTAATACCCCAGACCAAATCAAAGAAATCTTTGAATGGTCCGATACAG AAGAATACTTGCAAAACAAGGCTGTCAAAATTGCAAATATGTACCTTGATCCAAGTCAAGACCCACTCAAAAAGAAAGTA GCCAACGTTTTTCTTGAAACTTTCTTATTCTACTCTGGTTTCTACACTCCCCTTTATTATCTTGGTCACAACAAATTAAA CAATGTGGCTGAAATCATTAAGCTAATTTTACGGGACGAATCAGTTCACGGGACATACATTGGATACAAGTTCCAAGTCG GCTTACGTGATCGAACGGAAAAGCAACAACAAGATATGAAAGATTGGATGTATAATTTCCTTTATGAATTATATGATAAT GAAGAAAAATACACTCATCTTCTTTATGATCAAGTTGGTTGGACAGATGATGTTTTAACCTTCATCCGTTACAACGCTAA TAAGGCATTGATGAACCTTGGTCAAGATCCACTATTCCCTGATACCGCTTCTGATGTTAACCCAGTTGTTATGAACGGAA TTTCTACTTCTACTTCTAACCACGATTTTTTTAGCCAAGTCGGCAATGGATATCGCATGGGTGCCGTTGAAGCAATGAAT GATAGTGATTATGACGTTAAAGATCCAAACGCGGGAAAAGACATTAATGCCTGCGATTAA Protein sequence : MKLEEFKPVNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRELDDDHQWTVGHVFGGLTLLDTVQSEAG LTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIKEIFEWSDTEEYLQNKAVKIANMYLDPSQDPLKKKV ANVFLETFLFYSGFYTPLYYLGHNKLNNVAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDN EEKYTHLLYDQVGWTDDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVVMNGISTSTSNHDFFSQVGNGYRMGAVEAMN DSDYDVKDPNAGKDINACD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1479 | YP_001800873.1 | ribonucleoside-diphosphate reductase subunit beta | Not tested | Not named | Protein | 5e-71 | 48 |
