|
Name : LAR_0238 (LAR_0238) Accession : YP_001841234.1 Strain : Lactobacillus reuteri JCM 1112 Genome accession: NC_010609 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 283175 - 283633 bp Length : 459 bp Strand : - Note : - DNA sequence : ATGGCTAATAAATTAAATAGCTTAGCCCATACGAAGTGGTTATGTAAGTATCACATCGTATTCATACCAAAGTATAGACG TAAAGCGATCTTCAATCAATACCGAAGAGACCTGAGAGATTATATTCGTTTGTTGTGCAAATATAAGGGAGTAGAAATAA TTGAAGGTCATATGATGCCAGATCATGTGCACTTGTTAGTAAGTATTCCGCCGAAACTAAGTGTCTCGCAGTTTATGGGA TACTTAAAAGGGAAAAGTGCATTAATGATGTTTGATCGACATGCAAACTTAAAATACAAATATGGGAACCGACATTTTTG GGCTGAAGGCTACTATGTGAGTACAGTTGGATTAAATGAATCCACGATAAAGAAGTATATCCGAGATCAAGAGAAACATG ATATAGCAATGGATAAGCTAACAAGTGTGGAATATTCGGACCCTTTTAAGGGTAAGTGA Protein sequence : MANKLNSLAHTKWLCKYHIVFIPKYRRKAIFNQYRRDLRDYIRLLCKYKGVEIIEGHMMPDHVHLLVSIPPKLSVSQFMG YLKGKSALMMFDRHANLKYKYGNRHFWAEGYYVSTVGLNESTIKKYIRDQEKHDIAMDKLTSVEYSDPFKGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 2e-36 | 64 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 1e-36 | 64 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 1e-37 | 59 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 4e-36 | 58 |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 9e-33 | 52 |
