Gene Information

Name : LAR_1739 (LAR_1739)
Accession : YP_001842735.1
Strain : Lactobacillus reuteri JCM 1112
Genome accession: NC_010609
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATP-binding component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1954495 - 1955184 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAAAATTGAAGTTAGTAGATGTTAACAAATATTATGGCGAAGGAATTAGCCGTGTTCATGTTCTTAAAGATGTTAA
TTTTTCTGCTAAAGCGGGAGAATTAAATTTGATTTTAGGGCCTTCTGGATCAGGAAAGAGTACCTTTTTAACAATTGCGG
GCGGTTTACAAACGCCTACTTCCGGAAAAGTGTTAATTGATGGAATTAATATTGAAAAGTTATCTTCTAAAAAACGTGAT
GAACTGCGCTTGCAGAAAATTGGTTTTATTCTTCAGTCGTATAACTTGCTACCTTATCTAAATGTGGCTGATCAATTTAA
ACTTGTTGATCGTGTAAAGAAGAGCGGTAATATTTCATCAGCAGCTTTTGATGAATTATTGGAAAAACTCGCGATAAAAA
AACTGCTCAAGCAATACCCTTCTGAATTGTCAGGAGGTCAAAACCAACGAGTAGCGATTGCGCGTGCTTTATATACCGAT
CCTGAGATAATTCTTGCAGACGAACCAACAGCAGCTTTAGATAGTAATTTAGTAAAGTCAGTGGGACAATTATTTCAAGA
TCTGGCTAAAAAGAAAGGAAAAGCGGTGATTGCTGTAACCCATGATTTACGTTTACGTGAATATGCAGATAATGTTTACG
AGTTAGCCGATGGGAAACTTACATTAAGCAAAAATTCCACAGACCAATAA

Protein sequence : 
MSKLKLVDVNKYYGEGISRVHVLKDVNFSAKAGELNLILGPSGSGKSTFLTIAGGLQTPTSGKVLIDGINIEKLSSKKRD
ELRLQKIGFILQSYNLLPYLNVADQFKLVDRVKKSGNISSAAFDELLEKLAIKKLLKQYPSELSGGQNQRVAIARALYTD
PEIILADEPTAALDSNLVKSVGQLFQDLAKKKGKAVIAVTHDLRLREYADNVYELADGKLTLSKNSTDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-38 46
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAR_1739 YP_001842735.1 peptide ABC transporter ATP-binding component CP001581.1.gene798.p Protein 9e-28 42
LAR_1739 YP_001842735.1 peptide ABC transporter ATP-binding component CP001581.1.gene598.p Protein 2e-26 41
LAR_1739 YP_001842735.1 peptide ABC transporter ATP-binding component NC_012469.1.7686878. Protein 6e-26 41