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Name : LAR_1404 (LAR_1404) Accession : YP_001842400.1 Strain : Lactobacillus reuteri JCM 1112 Genome accession: NC_010609 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1585108 - 1587600 bp Length : 2493 bp Strand : - Note : - DNA sequence : ATGGATAATATGTTCACGCCAAGTGCAAAGCATGTTCTAGCAATTGCACAAGAACAAGCAAAATACTTTAAACACCAAGC AGTAGGGACTGAACACCTTCTGCTTGCCCTCTCAATGGATAAAGATGGGATTGCTAATAAAATATTTGAACAATTTTCTA TTACAAACGATGATATTCGTGAAGAAATTGAACGCTTAATTGGCTATGGAACGATGGAAAATCTGGGAGCTTCAGATTAT CTCCCATACTCACCAAAAGCAAAGCAAGTATTATCGTTAGCTGGTCGAGAAGCCCAACAAATGCATGCATTGAAGATTGG CACTGAACACTTATTATTAGCCTTAATCGCTGATGAAAGTGTCCTATCTTCACGGATTTTATATAGTCTAGATGTTGTGC CACGACAGATGAGAAAAGTAATTTTACGGCGGTTAGGGATTGCTGATAGTCAGCAACGCAATCCTAATCGTCAATCATCT CGTCGACGGATTCAGCAAACTGGTACACCAACATTGGATAAACTAGCTCGTGATATGACAGAACTTGCTCGGAATGGCCA GCTTGATCCTGTAATTGGTCGAAATAAGGAAGTTAAACGTGTGGAGCAGATTCTTAGTCGTCGTACCAAGAACAATCCTG TGCTGATCGGCGAACCTGGTGTAGGGAAGACGGCGATTGCTGAAGGGCTTGCTCAGCGGATGGTTGATGGTAAGGTTCCA GCTGAATTGGCTAATAAACGTTTGATGATGCTTGATATGGGATCATTAGTTGCGGGTACCAAGTATCGAGGAGAATTTGA AGATCGCCTTAAGAAAGTGATTGATGAGATTCAAAACGACGGGCATGTGATTCTTTTTATTGATGAACTCCATACCTTAA TTGGTGCTGGTGGCGCTGAAGGTGCAATTGATGCTTCCAATATTTTGAAACCGGCCTTAGCGCGAGGCGAGTTGCAAACA ATTGGTGCTACTACCCTTGACGAATATCAGAAATATATAGAATCTGATGCAGCACTTGAACGACGCTTTGCTACTGTTCA AGTTGATGAGCCAACTACTGACCAAACCCTGCAAATCCTGCGAGGACTACGACCGAAGTATGAGGAACACCACCATGCTA AGATTACTGATGAAGCGTTGGAAGAAGCGGTTAAATTGTCGGATCGTTATATTTCAGATCGTTTCTTGCCGGATAAAGCA ATTGATCTTATTGATGAATCGGCAGCTATGGTTCGGATTGATGCTGAAGATAAGAAAAATCATCAGCCTTCATTAGAAAG TCAGTTAGAAGATTTGCGAACCCAAAAAGAAGAAGCAATTGATAATCAAGACTTTGATCGTGCGGCTACTCTTCGTCAAC AAGAATTAGCACTAAAAGATAAGATTGATCGCAAAAAGCAACGTACTCAACAAAAGGATTCTCATAACTATAAATTGAAA GTAACTGGTGAAAACATTGCACAAGTTGTTGCTGAATGGACAGGAGTTCCTTTAACTCAATTGAAGAAGAGCGAGAGTGA ACGATTGGTTAACTTGGAAAAGGTTCTGCACCAACGAGTAATTGGTCAAGATGAAGCAGTTACCGTAGTCGCTAAGGCAA TTCGGCGTGCACGAAGCGGGCTTAAGGATCCTAGTCGGCCGATTGGTTCCTTTATGTTTTTAGGACCGACTGGGGTAGGA AAAACAGAGCTTGCCAAGGCATTATCCGCTGCAATGTTTGGCTCGGAAGATAATATGATCCGGATTGATATGTCAGAATA TATGGAAAAATATAGTACTAGTCGCTTGATTGGTGCTGCTCCAGGATATGTCGGCTATGACGAGGGTGGCCAATTAACTG AAAAAGTACGGCAACATCCATACTCAGTTGTCTTATTAGATGAAGCTGAAAAGGCACATCCGGATGTATTTAATTTATTA CTTCAAGTTTTAGATGATGGTTACTTAACTGATGCAAAAGGTCGGCGCGTTGATTTTAGAAATACCATTATTATTATGAC TTCTAACCTTGGAGCAACTCAGCTTCAGGATGAGAAAGAGGTTGGTTTTGGGGCAAAAGATATGTCACAAGACTATAATG CGATGGCGGCGGCGATTAAGCAACAAATGAGGTTATACTTCCGCCCAGAATTTCTTAATCGGATTGATGAAACGATTATC TTCCATTCATTACAAAAGAAAGAACTTCATCAAATTGTTAAACTCATGGTTAATGATTTAAATAAGCGGGTAAGCGAGCA AGGTATTAACTTGAAAGTTACGCCTGCTGCAATTGATGTGATCGCAAAGCTTGGTTACAATCCCGCTTATGGAGCTCGTC CGCTTCGTCGTGCTTTACAAGATCATGTTGAGGATGATTTGAGTACTGGACTGCTTAGTGGTGAAATCAATGTGGGGGAT GACGTAACAGTAGGTGCGCATCAAGGTAAAATTACTTTTAAAGTAAAGAAGCCGGATGAAGATAAAGCTGTTGAATTAAA ATTGAATAAATAA Protein sequence : MDNMFTPSAKHVLAIAQEQAKYFKHQAVGTEHLLLALSMDKDGIANKIFEQFSITNDDIREEIERLIGYGTMENLGASDY LPYSPKAKQVLSLAGREAQQMHALKIGTEHLLLALIADESVLSSRILYSLDVVPRQMRKVILRRLGIADSQQRNPNRQSS RRRIQQTGTPTLDKLARDMTELARNGQLDPVIGRNKEVKRVEQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRMVDGKVP AELANKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIQNDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQT IGATTLDEYQKYIESDAALERRFATVQVDEPTTDQTLQILRGLRPKYEEHHHAKITDEALEEAVKLSDRYISDRFLPDKA IDLIDESAAMVRIDAEDKKNHQPSLESQLEDLRTQKEEAIDNQDFDRAATLRQQELALKDKIDRKKQRTQQKDSHNYKLK VTGENIAQVVAEWTGVPLTQLKKSESERLVNLEKVLHQRVIGQDEAVTVVAKAIRRARSGLKDPSRPIGSFMFLGPTGVG KTELAKALSAAMFGSEDNMIRIDMSEYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHPYSVVLLDEAEKAHPDVFNLL LQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKEVGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNRIDETII FHSLQKKELHQIVKLMVNDLNKRVSEQGINLKVTPAAIDVIAKLGYNPAYGARPLRRALQDHVEDDLSTGLLSGEINVGD DVTVGAHQGKITFKVKKPDEDKAVELKLNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-93 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LAR_1404 | YP_001842400.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 59 |
| LAR_1404 | YP_001842400.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 2e-157 | 52 |
