Gene Information

Name : LAR_1161 (LAR_1161)
Accession : YP_001842157.1
Strain : Lactobacillus reuteri JCM 1112
Genome accession: NC_010609
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1318307 - 1318993 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTCGAATTTTAATTATTGAGGATGAGGAAAATTTAGCAAATTTTGTAGAACTTGAATTAAAGCATGAAGGCTACGA
TACAGATGTTGAACTTGATGGTCGTGCCGGACTAGAAGCAGCTTTAAATCAAGACTTTGACGTGATTTTGCTAGACTTGA
TGCTCCCAGAGTTAAATGGGATTGAAGTTGCACGACGGGTTCGTGAAATAAAAGATACACCAATTATTATCATGACCGCT
CGTGATTCTGTTATTGACCGTGTCTCTGGTTTAGATCATGGGGCAGATGATTATATTGTTAAGCCATTTGCTATTGAAGA
ACTCCTTGCACGGGTGCGGGCGTTATTACGGCGAATCAGTATTGAAGATGGTAATAATAAAGAACACCAAACAACGGTCA
ATTACAAGGATCTTACCATTGAAAAAGAGAATCGGGTCGTTCGTCGTGGTGATGAAGTAATTAACCTTACAAAGCGGGAA
TACGAATTACTCTTGATTTTGATGGAAAATATCAATGTTGTTATGTCACGAAAAGACCTTTTGAGTAAGGTGTGGGGTTA
TGACTCCAAAGTTGAAACCAATGTTGTTGATGTTTATATTCGGTACTTACGGAATAAGATCGACCGACCTGGTGAAAAGA
GCTACATCCAAACGGTTCGTGGTACTGGATATGTGATTCGCTCCTAG

Protein sequence : 
MSRILIIEDEENLANFVELELKHEGYDTDVELDGRAGLEAALNQDFDVILLDLMLPELNGIEVARRVREIKDTPIIIMTA
RDSVIDRVSGLDHGADDYIVKPFAIEELLARVRALLRRISIEDGNNKEHQTTVNYKDLTIEKENRVVRRGDEVINLTKRE
YELLLILMENINVVMSRKDLLSKVWGYDSKVETNVVDVYIRYLRNKIDRPGEKSYIQTVRGTGYVIRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-27 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAR_1161 YP_001842157.1 two-component response regulator HE999704.1.gene1528. Protein 3e-75 71
LAR_1161 YP_001842157.1 two-component response regulator NC_003923.1003417.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator NC_013450.8614146.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator NC_002951.3238224.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator NC_007793.3914065.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator NC_002758.1121390.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator NC_010079.5776364.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator NC_002952.2859858.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator NC_007622.3794948.p0 Protein 1e-49 54
LAR_1161 YP_001842157.1 two-component response regulator AE015929.1.gene1106. Protein 6e-45 53
LAR_1161 YP_001842157.1 two-component response regulator BAC0125 Protein 3e-34 43
LAR_1161 YP_001842157.1 two-component response regulator BAC0197 Protein 8e-31 42
LAR_1161 YP_001842157.1 two-component response regulator BAC0308 Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAR_1161 YP_001842157.1 two-component response regulator VFG1390 Protein 1e-37 44
LAR_1161 YP_001842157.1 two-component response regulator VFG1563 Protein 4e-27 41
LAR_1161 YP_001842157.1 two-component response regulator VFG1702 Protein 4e-27 41
LAR_1161 YP_001842157.1 two-component response regulator VFG1389 Protein 3e-34 41