|
Name : LAR_1095 (LAR_1095) Accession : YP_001842091.1 Strain : Lactobacillus reuteri JCM 1112 Genome accession: NC_010609 Putative virulence/resistance : Unknown Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1254237 - 1256309 bp Length : 2073 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : TTGGTTACTGGTTGTGTTAAAAAAGAGGTGAAAGATTTGCGGAGTTTAACGGATTCCGTCGCCAATTTAAAAGGAGTTGG TCCTAAGCGAGTAGCAGATCTAGCTACTCTGGGAATAGATACTATTGAAGATTTGTTGACGTATTATCCCACTCGCTATA ACGATTTCACGCCTACAGACATTGAAAGCGCCAAGGATAAACAGAAAATTACTCTTCAAGGAGTAGTGGTATCAGAACCG CTCTTGGTCCGCTATGGTTATCGGCGCAACCGGCTTACCTTTCGAATGCAGGTAGGTAATGAAGTGGTAATCGCAACTTT TTTTAATCAGCCCTATATTAAAAAGCAAATCGAACTAAATCAGCAAGTAACTGTAATGGGGAAGTGGGATGCACCTCGCC GTCAAGTAACAGGAAACAAACTTCTTAAGGAAAAAGCTGATGATCGAAATGAGTTTGGTGCGGTCTATGCGGTGAATAAG CATATCCGGCAAAATGTCCTCCAAAGTTTTATTCGTCAAGCTTACGAGGAATATGCCAATATCATTCCAACGTATTTGCC AGAAACGATTCGTCAACGATACCGGTTAATGGATCGGCGACAAATGATTAGGGAAATTCACTTTCCACAAACTCAGGCAA CTGCAAAAGCCGCCCGCCGAACAGCAGCTTACGAAGAGTTTTTCCTGTTTCAGTTACGACTGCAAGCAATTCGCCGTGCC CACCGTCAAGAAGATGGCGAGCGGATTTTATACCATAATGACGAGTTAAAAGAATTTATTGGCGGACTCCCATTTGAATT AACTGATGCCCAAAAACGGGTTGTTAATGAAATTTGTCGTGATATGCGTCAACCATACCAGATGAATCGCTTGTTGCAGG GGGATGTTGGTTCTGGAAAGACAATTGTTGCTGCTATTGCCATTTATGCAGCTATTACTGCGGGCTATCAAGCAGCTTTA ATGGCGCCGACAGAAATTCTGGCAGGACAACATGCTAAGAAATTAGCGAAAATTTTTGAAGGAACCCATGTCCAGGTTGC TCTCCTGACTGGTTCATTGACTGCTAAGCAACATCGGGAACTATTGACGGCGATGAAGCGAGGAGATGTCAACCTCATTG TCGGAACCCATGCGCTAATTCAAGATGGAGTTGAATATGCTAATCTCGGTCTGGTAATTACTGATGAACAGCACCGTTTT GGGGTCAACCAGCGTCAGCAACTTCGTGAAAAAGGCGAACATCCTGATGTATTAGCCATGACAGCAACTCCTATCCCACG GACACTAGCGATTACTAATTATGGTGAAATGGATGTTTCGATAATTGACCAATTACCGGCTGGTCGAAAACCAATTCAAA CAAAGTGGCTGCAGTCTAACCAACATGCCGCAGCAATCCATTTTTTGCGTGAACAATTAAAGCAGGGAGCACAGGCGTAT GTTGTGAGTCCGTTGATTGAGGAATCAGCGGCTCTAGATGTACAAAACGCAACTGATCTTTATAATCAGCTATCGGCCGA TCTTGAGCCAGCTTATAAAGTGGGCTTACTCCATGGACGAATGGGGACGGAAGAAAAAGATGAAGCGATGCGCCAGTTTA AATCTGGTGAGCTTCAAGTTTTAGTTGCAACCACGGTTATTGAAGTTGGCGTTGATAATCCTAATGCAACGGTAATGGTT ATATATGATGCTGATCGTTTTGGGCTTGCACAGCTTCACCAATTACGTGGTCGGGTTGGTCGAGGCAGCCGGCAAAGTTA TTGTCTATTAATTGCCGATCCGAAAACTGATGAAGGAAAAGCCCGGATGAAAACGATGGTTGCTACCGATGATGGATTTA AGATAGCTGAGCAAGATTTGAAACTGCGTGGATCTGGAGATGTTCTAGGAAAAAAGCAATCGGGGATGCCAGAATTTAAA GTGGGTGATCCGGTTGCTGATTTAAAGATGCTGCAAATTGCCCGTGCAGATGCTGGAAACCTATTAGGCATGTCCAAGTG GGATCAGGTCGATGAAAATCAGCCACTTGTTTTATATTTAAAGCGTCATGAACTGGAGACGCACTTTGACTAA Protein sequence : MVTGCVKKEVKDLRSLTDSVANLKGVGPKRVADLATLGIDTIEDLLTYYPTRYNDFTPTDIESAKDKQKITLQGVVVSEP LLVRYGYRRNRLTFRMQVGNEVVIATFFNQPYIKKQIELNQQVTVMGKWDAPRRQVTGNKLLKEKADDRNEFGAVYAVNK HIRQNVLQSFIRQAYEEYANIIPTYLPETIRQRYRLMDRRQMIREIHFPQTQATAKAARRTAAYEEFFLFQLRLQAIRRA HRQEDGERILYHNDELKEFIGGLPFELTDAQKRVVNEICRDMRQPYQMNRLLQGDVGSGKTIVAAIAIYAAITAGYQAAL MAPTEILAGQHAKKLAKIFEGTHVQVALLTGSLTAKQHRELLTAMKRGDVNLIVGTHALIQDGVEYANLGLVITDEQHRF GVNQRQQLREKGEHPDVLAMTATPIPRTLAITNYGEMDVSIIDQLPAGRKPIQTKWLQSNQHAAAIHFLREQLKQGAQAY VVSPLIEESAALDVQNATDLYNQLSADLEPAYKVGLLHGRMGTEEKDEAMRQFKSGELQVLVATTVIEVGVDNPNATVMV IYDADRFGLAQLHQLRGRVGRGSRQSYCLLIADPKTDEGKARMKTMVATDDGFKIAEQDLKLRGSGDVLGKKQSGMPEFK VGDPVADLKMLQIARADAGNLLGMSKWDQVDENQPLVLYLKRHELETHFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-89 | 41 |
