Gene Information

Name : LAR_1060 (LAR_1060)
Accession : YP_001842056.1
Strain : Lactobacillus reuteri JCM 1112
Genome accession: NC_010609
Putative virulence/resistance : Unknown
Product : phage Clp-protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : -
Position : 1219590 - 1220324 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
ATGATGACCAAGATTAACGTTAAGGGCGTTATTGTCAGCAATGATGATGCCGATATCTATGATTGGCTTGGATATGATTG
TGTTAGCCCTAATCAAGTAGAAGATGTACTTAATAATAGCGATGAGGATATTGAAGTTGATATTGCTAGCGGTGGGGGTA
GCGTCTTTGCTGCTTCCGAAATCTATACCATGCTTAAAGCTTATTCAGGTAAGGTAGTAGTTAATATTCAAGGATTAGCT
GCTTCTGCTGCTTCTGTTATTGCGATGGCAGGGGATGAAATCAACATGAGTCCTACCAGTCAAATGATGATTCATAAAGC
CTCTACTATTTCTATGGGGAATGCGGATGACTTTGCGCATGATTCTAAGATGTTAGATGTTATGGACCAGTCTATTGTTA
ACGCTTATGAAGCTAAGACGGGAATGGATCGTGACGATATCTTACAGTTAATGGCTAATGAAACTTGGATGACTGCTCAA
GATGCAGTTGACAAGGGCTTTGCTGATAATATTTCGGCTGGTTCTAAAACTCCCCAAGTGGTTAATGCTGTTAGCAACCA
ACCCATTCTTAATTCTACTGCTATCGCAAAAATCAAAACTGTTCTGGCTAAAGCACGAGATGCCAAGTCTAAAAACGAAG
TGGAAACACCGATAAATAACAAAGAAAAGCCAACTCCTAGTCTTAAAGATCAGAAGTTGGCAATTTTACTAGGAGATGAA
ATTAATGGGAATTAA

Protein sequence :
MMTKINVKGVIVSNDDADIYDWLGYDCVSPNQVEDVLNNSDEDIEVDIASGGGSVFAASEIYTMLKAYSGKVVVNIQGLA
ASAASVIAMAGDEINMSPTSQMMIHKASTISMGNADDFAHDSKMLDVMDQSIVNAYEAKTGMDRDDILQLMANETWMTAQ
DAVDKGFADNISAGSKTPQVVNAVSNQPILNSTAIAKIKTVLAKARDAKSKNEVETPINNKEKPTPSLKDQKLAILLGDE
INGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0824 YP_002746160.1 phage ClpP protease Not tested ¥ÕSeq2 Protein 2e-27 44
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 9e-32 42
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-32 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 9e-32 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 9e-32 42
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 4e-32 42
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 2e-31 41