Gene Information

Name : LAR_0107 (LAR_0107)
Accession : YP_001841103.1
Strain : Lactobacillus reuteri JCM 1112
Genome accession: NC_010609
Putative virulence/resistance : Unknown
Product : pyrimidine nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : -
Position : 138823 - 140121 bp
Length : 1299 bp
Strand : +
Note : -

DNA sequence :
ATGCGAATGGTTGATATCATTGACACCAAGAGAAATGGCGGCGTTCTGAGTGATGAGCAATTACAATTCTTTGTTGATGG
CGTCGTTAATGGAACGATTCCTGACTATCAAATCAGTGCTCTCCTTATGGCAATCTACTTCCAGGATATGACCAAAGAAG
AACAGACGAGCCTAACAATGAAGATGATGGAGTCTGGTGAACGATTAGATTTGAGCCGAATCCCTGGAATTAAGGTTGAT
AAACATTCAACGGGTGGTGTTGGTGATAAAGTGAGTCTGCCACTTGCAGCAATGGTCGCCGCTACAGGAATTCCGGTTCC
AATGATTTCAGGTCGTGGCCTTGGTCATACAGGAGGCACGCTTGACAAGTTAGAAGCGATTCCAGGATTTCGGGTAGAAC
TTTCCGAAGATGAGTTCATTAATCAAGTTGCCAAAGAAAAATTAGCAATTGTAGGTGCGACTGGTGAGGTTGCGCCAGCG
GATAAGAAGATTTATGGATTACGGGATGTTACTGACACTGTTGACTCAATTCCGTTAATTGCTAGTTCAATTATGAGTAA
GAAGATTGCTTCTGGAACAGATGCGCTTGTAATTGATGTTAAAACTGGTACTGGTGCCTTTATGAAGACCCTTGATCAAT
CAAGACTACTGGCTAAAGCGTTAGTTGAGATTGGTAAACAAGCAGGATTAAAGTGCATGGCAGTAATCTCAGATATGAAC
CAGCCACTTGGAAATAAAATTGGTAATGCCCTTGAAATTGAAGAATCAATTGATGTCTTAAAAGGAAAGGGACCAAAAGA
TCTTACTGAATTAGTTTTGACGCTTGGTAGTTATATGGTTGTAATGGGTGAAAAAGCACAAAACACTACTGAAGCACGAA
AGATGTTAGAGCAAACTATTCAGGATGGATCAGCCTTTGAACGGTTTGCAGCAATGATAAAAGCACAAGGTGGAGATCCA
GCTGTTGTTGATAACTATCAATTAATGCCGCAAGCTAAATATAAGATTCCGTTCAAAGCTGATCGGGATGGAGTATTGAC
AAAGCTTTCAGCGGATGAAGTTGGAACTGCCAGCATGTTATTAGGCGGAGGCCGTCAAAAGGCAGATGATGCCCTTGATT
ATAGTGTAGGAATTGAATTACACCATAAGCTGGGTGATTACGTTAAAGATGGCGAACCAATTTTAACAATCTATAGTAAC
CGCCAAGAAATTCCAGATATAGAACAGTTGCTAAGAGAAAGTATTAAAATTAGCGATGATGGCAAAGTACCAACGTTAAT
TCATGAAATTATTGAATAA

Protein sequence :
MRMVDIIDTKRNGGVLSDEQLQFFVDGVVNGTIPDYQISALLMAIYFQDMTKEEQTSLTMKMMESGERLDLSRIPGIKVD
KHSTGGVGDKVSLPLAAMVAATGIPVPMISGRGLGHTGGTLDKLEAIPGFRVELSEDEFINQVAKEKLAIVGATGEVAPA
DKKIYGLRDVTDTVDSIPLIASSIMSKKIASGTDALVIDVKTGTGAFMKTLDQSRLLAKALVEIGKQAGLKCMAVISDMN
QPLGNKIGNALEIEESIDVLKGKGPKDLTELVLTLGSYMVVMGEKAQNTTEARKMLEQTIQDGSAFERFAAMIKAQGGDP
AVVDNYQLMPQAKYKIPFKADRDGVLTKLSADEVGTASMLLGGGRQKADDALDYSVGIELHHKLGDYVKDGEPILTIYSN
RQEIPDIEQLLRESIKISDDGKVPTLIHEIIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 3e-79 48