|
Name : cinH (ACICU_p0014) Accession : YP_001840869.1 Strain : Genome accession: NC_010605 Putative virulence/resistance : Virulence Product : site-specific recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 10064 - 10645 bp Length : 582 bp Strand : + Note : DNA invertase Pin homologs DNA sequence : TTGGGGCGTGAAAAAGTGAAAGGCCAAAAAGTAGGGTATGTCCGTGTAAGTTCTGTCGAGCAAAACACTGGACGTCAACT TGAAGGAATTGAGGTCGACCGGATTTTTGTTGACCGTGCTTCAGGTAAAAATACTGACCGACCTAAATTTCAGGAAATGT TGAACTATGTGCGGGAAGGGGACAGGGTGATTGTACATTCAATGGATCGTTTTGCGCGAAGCCTAAAAGATTTGGTCACT GAAGTAGATAAACTGGTCAAACGAGGGATCGCCATCCAATTTGTAAAAGAAAATATTACTTTTACAGCCGAATCCACCCC GATGGATAATTTGATGCTTCAAATGATGGGTGCTTTTGCACAGTTCGAACGTGAGATCATTTTAGAGCGGCAAAAGGAAG GAATAAAACTCGCCTCTGCTCAGGGGAAGTACAAAGGTCGGGTGCATAAACTAAAGCCTGACCAAGCTGAAGCTTTACGA CAAGCATGGAAGGAGGGGAAGTATCCATCGAAAATGGCATTAGGGAAAGCTTTTGGGATTAGTCGTCAGGCGGTATACCG ATATTTACAAGTTAGTGAATAG Protein sequence : MGREKVKGQKVGYVRVSSVEQNTGRQLEGIEVDRIFVDRASGKNTDRPKFQEMLNYVREGDRVIVHSMDRFARSLKDLVT EVDKLVKRGIAIQFVKENITFTAESTPMDNLMLQMMGAFAQFEREIILERQKEGIKLASAQGKYKGRVHKLKPDQAEALR QAWKEGKYPSKMALGKAFGISRQAVYRYLQVSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpR | ACY75537.1 | TnpR | Not tested | Tn6060 | Protein | 4e-49 | 55 |
| tnpR | ACF06154.1 | resolvase | Not tested | Tn5036-like | Protein | 1e-46 | 52 |
| tnpR | AAL08439.1 | resolvase TnpR | Not tested | SRL | Protein | 2e-47 | 50 |
| tnpR | AFV53121.1 | Tn21 resolvase | Not tested | AbGRI2-1 | Protein | 2e-47 | 50 |
| tnpR | YP_006098373.1 | transposon Tn21 resolvase | Not tested | Tn2411 | Protein | 3e-47 | 50 |
| res | YP_005124341.1 | DNA-invertase | Not tested | Not named | Protein | 3e-27 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cinH | YP_001840869.1 | site-specific recombinase | VFG1030 | Protein | 8e-48 | 50 |
