Gene Information

Name : lolD (LEPBI_I0265)
Accession : YP_001837686.1
Strain :
Genome accession: NC_010602
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.25
Position : 258646 - 259443 bp
Length : 798 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter

DNA sequence : 
GTGTTAGAATTTAAAAATGTGTTCAAATCATTTCACAATGAAGAGGAAACGATTGATGTGTTGAAAAACATTTCATTTCG
CATGGAAACTGGTGAATTTGTAGCGATTATTGGCCCATCTGGCTCAGGTAAATCCACTTTACTCGGTGTCGCTGCAGGTC
TCGACAAACCCGATACAGGCATCATCTCACTTGATGGGATTGATTTGACCAAACAAAATGAATCCAAACTTGCTGATATA
CGAGCAGATCAAATTGGATTCATCTTTCAAAACTTCCAATTATTACCTGGCCTCAATGCCATCGAGAATGTTGGGATCCC
TTTGTACTTAAAGTCATCTCTTTCTGAAAAAGAAATTTTGTCAAAAGCGGAAAAAATTTTGGAATCGGTAGCAATGTCAC
ATCGTGCCACACACTTCCCGAAACAGTTGTCAGGTGGCGAAGAGCAAAGAATTGCCATCGCGAGAAGTTTTGTGAACGAT
CCTAAAATTATTTTTGCAGATGAACCAACAGCCAACTTGGATTATAAAAATAGCAAAACGATTTTAGATCTACTTTTATA
CCGAAACAAAAAACAAGGAACCACTCTTGTTGTGGTGACTCACGACCCAGAGGTTGCAAAACTTGCGGATCGTGTTTTGG
AAATGAAAGATGGTGAAATCATTTCGGATTCAAAGAATGGTTCCAAACCTCAAAATCGTAAATCTATTCCGAAAGTTAAG
GTGTCTCCTCCGATCTCATCTAAATCCTCCACCAAACAAAGAAAAACGACGAAACAGGCAAAGAAGGTGAGTCGATGA

Protein sequence : 
MLEFKNVFKSFHNEEETIDVLKNISFRMETGEFVAIIGPSGSGKSTLLGVAAGLDKPDTGIISLDGIDLTKQNESKLADI
RADQIGFIFQNFQLLPGLNAIENVGIPLYLKSSLSEKEILSKAEKILESVAMSHRATHFPKQLSGGEEQRIAIARSFVND
PKIIFADEPTANLDYKNSKTILDLLLYRNKKQGTTLVVVTHDPEVAKLADRVLEMKDGEIISDSKNGSKPQNRKSIPKVK
VSPPISSKSSTKQRKTTKQAKKVSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001837686.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-42 46
lolD YP_001837686.1 ABC transporter ATPase NC_008702.1.4606598. Protein 3e-32 41
lolD YP_001837686.1 ABC transporter ATPase CP001581.1.gene598.p Protein 3e-32 41
lolD YP_001837686.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-34 41