|
Name : gabD (LEPBI_I2654) Accession : YP_001840009.1 Strain : Genome accession: NC_010602 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2750274 - 2751731 bp Length : 1458 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8297211, 12446648, 2254272; Product type e : enzyme DNA sequence : ATGAAATACATCAAAGACAAAGACCTTTTTCGCCAGGAAAATTTCATCGGTGGGGTTTGGTGCCTTGCAGAAAACAAAAA AGAAATTTTAGTACAAAACCCTGCAACCGGGGAAACCATCGGGAACATCCCCCACTCGACTGAAAAAGATACATTGATCG CCATTCGTTCAGCAAAGGAAGCATTTGCCGATTGGAAGTCAAGACCTGCCAAAGAACGAGCGGGAATCTTACGCAAATGG TTCCAACTCATGATGGAAAACCAAGAAGACCTAGCCCTCATCATGACCCAAGAACAAGGAAAGCCCCTAACAGAAGCTAG GGGGGAGATTGCCTATGCTGCCTCCTACATTGAATGGTTCGGGGAAGAAGCAAAACGTTCGTATGGAGATGTCATCCCTT CTCACAGAAAAGACACTCGGATCTTAGTTTTAAAAGAACCCATCGGAGTTGTCGGAACCATCACTCCTTGGAATTTCCCT GCCGCTATGCTTGCAAGAAAAGTGGCCCCTGCCCTTGCGGCCGGTTGCACAGTGGTATCAAAACCGGCTGAACTCACACC CTATTCCGCACTTGCAATGGCGGTCCTTGCCGAACGTGCGGGACTTCCGAAAGGCGTCTGGAACGTGTTAGTTGGTGATC CAATTGCCATCGGGAAAGCAATTTTGGAAAGTAAGGACGTTCGTAAACTCAGTTTCACAGGTTCCACCAAAACGGGTATG TACTTGATGGAAAAATCAGCTGCCACTTTAAAAAAACTTTCATTGGAACTTGGTGGAAATGCTCCCTTCATCGTATTTGA AGATGCGGACTTAGACGAAGCCGTCAAAGGTGCGATGCTTTCTAAGTACCGAAACACAGGCCAAACTTGTGTGTGTGTGA ATCGGTTCCTCGTACATACATCTGTCGCGGAGTCTTTTTCCAAAAAACTCGCGGAAAAAACCAAAGAACTGGTTGTTGCC AATGGAATGGAGCCGAGTGCCAGCCAAGGACCCTTAATCAACGAAGCAGCCGTTGAGAAAGTTAAATCCCATATCCAAGA TGCAGTGGGCAAAGGTGCCAAGGTACTCATCGGTGGCAACACACACCCATTAGGTGGGAATTTCTTTGAACCTACCGTTT TGTATCCTGTGAATTCTTCCATGATGGTCACAAAAGAAGAAACCTTTGGCCCTGTCTCCTGTATCCAAACCTTTCAAAAC GAAGAAGAAGCCATCCATCTAGCCAATGATACCGACTTTGGACTCGCTTCTTATTTTTACACGAAAGACATGGCTCGTAT TTTTCGAGTCGCCGAACAGTTAGAATATGGCATGGTAGGCATTAACGAAGGGATCATTTCTTCCGAACAAGTCCCTTTTG GCGGAGTCAAATTTTCAGGAATGGGAAGAGAAGGCTCCAAATACGGTCTCGATGATTATACGGTAACCAAATATCTCTGC CTCGGAGGAATCAAATGA Protein sequence : MKYIKDKDLFRQENFIGGVWCLAENKKEILVQNPATGETIGNIPHSTEKDTLIAIRSAKEAFADWKSRPAKERAGILRKW FQLMMENQEDLALIMTQEQGKPLTEARGEIAYAASYIEWFGEEAKRSYGDVIPSHRKDTRILVLKEPIGVVGTITPWNFP AAMLARKVAPALAAGCTVVSKPAELTPYSALAMAVLAERAGLPKGVWNVLVGDPIAIGKAILESKDVRKLSFTGSTKTGM YLMEKSAATLKKLSLELGGNAPFIVFEDADLDEAVKGAMLSKYRNTGQTCVCVNRFLVHTSVAESFSKKLAEKTKELVVA NGMEPSASQGPLINEAAVEKVKSHIQDAVGKGAKVLIGGNTHPLGGNFFEPTVLYPVNSSMMVTKEETFGPVSCIQTFQN EEEAIHLANDTDFGLASYFYTKDMARIFRVAEQLEYGMVGINEGIISSEQVPFGGVKFSGMGREGSKYGLDDYTVTKYLC LGGIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-142 | 58 |
