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Name : clpC (LEPBI_I2574) Accession : YP_001839931.1 Strain : Genome accession: NC_010602 Putative virulence/resistance : Virulence Product : ATPase ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2660602 - 2663151 bp Length : 2550 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8195092, 8016066; Product type r : regulator DNA sequence : ATGTTGGAATTCACCAAAAGAGCAAAAAGAGTCATCAACGAAATCGCCCAAGATGAGGCTAAACGTTTAGGTTCCGATTT TATCGGTCCTGAACACATTCTACTTGGGCTTCTCCGGGAGGAGGACTCTGTCGCGATTAAGATTCTCACGAATCTAAACA TCAATTTAAACGAACTCCGTAAAGAAGTGGAGAAACGTACCCGCGAGGGTTCGGGTGCTTTGTTACTCGATGTCAGCCAA GGGCAAGACAAGTACCAAAAAATGATCGAAGTTTCCAAAGAAGAGGCAAAACGCCTCAAACATAACTATGTGGGAACCGA GCACATTCTCCTCGCATTACTTCGTGATAATAATAATATAGCGGGAGGATCTTTATCTTCCTTTAGCGTAAATTATAATG TCATCAAATCGGAAATTTTACGTCTGTTAGGCGCACCTCCTTCAGGAGCTGTGGGTGGTTCCACTGGGACCCAGTCCACA GGCCAAAGCCAATCACAAACGGCAGCACCAAGACAAGAAAAAAGTAAAACTCCGATCCTTGATGAATTTGCACGAGACCT CACACAATTGGCACGTGAGAAAAAATTGGACCCAGTCATTGGGCGCTCAAAAGAAATCGAACGTGTGATCCAAATTTTAT CGAGAAAAACCAAAAACAACCCGGTTCTCGTCGGAGAATCAGGTGTTGGGAAAACGGCGATCGTGGAAGGCCTTGCGCAA GCTGTGATCGAAAAATTGGTCCCAGATTTACTTTTCGATAAACGAGTGTTATCTTTAGATTTGGCAAGCCTCATTGCAGG TACCAAATACCGTGGTGAGTTTGAAGAACGATTGAAAAAAATCATGAAAGAAATCGTCACTTCCCAAAACATCATCATCT TCATTGATGAGTTGCACACTCTGATTGGGGCTGGGGCCGCAGAAGGGGCAGTGGATGCCGCAAACATTTTAAAACCGGCA CTCGCACGTGGCGAACTCCAATGCATTGGAGCAACAACGAATAACGAATATCGTAAATACATCGAAAAAGATTCTGCATT GGAACGAAGGTTCCAAATGGTGAAGGTACTCGAACCTTCCGTTGACGATGCGGTTCTTATTTTGGATGGATTGAAAAAAG CATACGAATCCCACCATAAGGTGCGTTATTCGGAAAAAGCCATCGAACAGGCAGTCAAACTTTCACACCGTTATATCAAC GACAGGTTTTTACCAGACAAAGCAATTGATATCATCGATGAAGCAGGAGCCAAAGCAAGACTTGCCAATTGCCAACGACC AAATGAAATCAAAGAGATCGAAGAAGAGATCAAATCGTTATCTCTGAAAAAAGAAGATTTGGTTCGTAGCCAAGAGTATG AAAAAGCGGCCGCTGTTCGCGATGAAGTGAATCGTAAAAAAGGTGAATTGGAAGAAAAAACCAAACAATGGCAAGAGAGA ATGGAAGGGTATGCCGTTTCCATCGAGGAAGAAGACATCCTTTCTGTTGTCAGTCTTTGGACGGGAATTCCATTGAAAAA AATGGAACAATCCGAAAACACAAAACTTCTTAATTTGGAAGAAGACATCAAATCTCGAATTGTTGGGCAAACCGAAGCGA TTGAAAAAGTGGCACGTGCCGTCAGACGCTCTCGCACTGGTCTCAAAAGTGAAAAACGACCTACTGGATCGTTTATTTTC CTTGGACCAACTGGTGTGGGAAAAACGGAACTTGCAAAAGCCCTCGCGGAACAATTGTTCGGTTCGGAAGACAATATGCT TCGTATCGATATGTCGGAATACATGGAGCCACATGCGGTATCAAGACTGATTGGAGCTCCTCCTGGTTATGTAGGGTATG ATGATGGTGGCCAACTCACAGAATTTGTGAGAAGAAAACCATACAGTTTGGTTTTACTTGATGAGATCGAAAAAGCCCAC CATGATTTGTTTAATATCCTTTTGCAAATTATGGAAGAGGGGAATTTAACCGATACGAAAGGTCGTAAGGTCAACTTCCG AGATACCATCATCATCATGACATCCAATATTGCCGCGAAGGAAATATCCAAAGGTGGAAGATTGGGTTTTGAAGATTTTG CAGACGAAAGGGAAGCTTATAAGGCTGAACAGGCAAGAGAACAACTTAAAAAACATTTTAATCCTGAGTTTTTAAACCGT GTGGATGAAGTGGTTTACTTTGCTCCTCTCAAAAAAGAAGAAATCGTTAGCATTGTGGATATCATGTTAAAAGATTTTAA CAAACGTTTGACGGAGAAAAAAGTATTCGTGGAACTCACATTCGCTGCAAAAGAACATTTTGCTACGATTGGATACGACC AAAACTACGGAGCCCGACCACTCCGACGTGTGTTCCAAAGAGAATTGGAAGATTATATGGCGGTTCAGTCTCTCAAAGGT GTTTATGAAAACCCTACTAAAATTTTGGTAGATATGGCAGAAGGAAAACTTGTGTATTCCGAATCAGCTTGGGAAGATTA CAAAGAAGTTCCTAAAAAAGACGATGGATCTTCGCCAAACACTGAGGAAAAAGACTTAGCCCTCGTATAA Protein sequence : MLEFTKRAKRVINEIAQDEAKRLGSDFIGPEHILLGLLREEDSVAIKILTNLNINLNELRKEVEKRTREGSGALLLDVSQ GQDKYQKMIEVSKEEAKRLKHNYVGTEHILLALLRDNNNIAGGSLSSFSVNYNVIKSEILRLLGAPPSGAVGGSTGTQST GQSQSQTAAPRQEKSKTPILDEFARDLTQLAREKKLDPVIGRSKEIERVIQILSRKTKNNPVLVGESGVGKTAIVEGLAQ AVIEKLVPDLLFDKRVLSLDLASLIAGTKYRGEFEERLKKIMKEIVTSQNIIIFIDELHTLIGAGAAEGAVDAANILKPA LARGELQCIGATTNNEYRKYIEKDSALERRFQMVKVLEPSVDDAVLILDGLKKAYESHHKVRYSEKAIEQAVKLSHRYIN DRFLPDKAIDIIDEAGAKARLANCQRPNEIKEIEEEIKSLSLKKEDLVRSQEYEKAAAVRDEVNRKKGELEEKTKQWQER MEGYAVSIEEEDILSVVSLWTGIPLKKMEQSENTKLLNLEEDIKSRIVGQTEAIEKVARAVRRSRTGLKSEKRPTGSFIF LGPTGVGKTELAKALAEQLFGSEDNMLRIDMSEYMEPHAVSRLIGAPPGYVGYDDGGQLTEFVRRKPYSLVLLDEIEKAH HDLFNILLQIMEEGNLTDTKGRKVNFRDTIIIMTSNIAAKEISKGGRLGFEDFADEREAYKAEQAREQLKKHFNPEFLNR VDEVVYFAPLKKEEIVSIVDIMLKDFNKRLTEKKVFVELTFAAKEHFATIGYDQNYGARPLRRVFQRELEDYMAVQSLKG VYENPTKILVDMAEGKLVYSESAWEDYKEVPKKDDGSSPNTEEKDLALV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-179 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001839931.1 | ATPase ClpC | VFG0079 | Protein | 0.0 | 53 |
| clpC | YP_001839931.1 | ATPase ClpC | VFG0080 | Protein | 8e-148 | 52 |
