Gene Information

Name : SPCG_1623 (SPCG_1623)
Accession : YP_001836340.1
Strain : Streptococcus pneumoniae CGSP14
Genome accession: NC_010582
Putative virulence/resistance : Virulence
Product : manganese ABC transporter manganese-binding adhesion liprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1593340 - 1594281 bp
Length : 942 bp
Strand : +
Note : -

DNA sequence :
TTGGAGGATCTAATGAAAAAATTAGGTACATTACTCGTTCTCTTTCTTTCTGCAATCATTCTTGTAGCATGTGCTAGCGG
AAAAAAAGATACAACTTCTGGTCAAAAACTAAAAGTTGTTGCTACAAACTCAATCATCGCTGATATTACTAAAAATATTG
CTGGTGACAAAATTGACCTTCATAGTATCGTTCCGATTGGGCAAGACCCACACGAATACGAACCACTTCCTGAAGACGTT
AAGAAAACTTCTGAGGCTGATTTGATTTTCTATAACGGTATCAACCTTGAAACAGGTGGCAATGCTTGGTTTACAAAATT
GGTAGAAAATGCCAAGAAAACTGAAAACAAAGACTACTTCGCAGTCAGCGACGGCGTTGATGTTATCTACCTTGAAGGTC
AAAATGAAAAAGGAAAAGAAGACCCACACGCTTGGCTTAACCTTGAAAACGGTATTATTTTTGCTAAAAATATCGCCAAA
CAATTGAGCGCAAAAGACCCTAACAATAAAGAATTCTATGAAAAAAATCTCAAAGAATATACTGATAAGTTAGACAAACT
TGATAAAGAAAGTAAGGATAAATTTAATAAGATCCCTGCTGAAAAGAAACTCATTGTAACCAGCGAAGGAGCATTCAAAT
ACTTCTCTAAAGCCTATGGTGTCCCAAGTGCCTACATCTGGGAAATCAATACTGAAGAAGAAGGAACTCCTGAACAAATC
AAGACCTTGGTTGAAAAACTTCGCCAAACAAAAGTTCCATCACTCTTTGTAGAATCAAGTGTGGATGACCGTCCAATGAA
AACTGTTTCTCAAGACACAAACATCCCAATCTACGCACAAATCTTTACTGACTCTATCGCAGAACAAGGTAAAGAAGGCG
ACAGCTACTACAGCATGATGAAATACAACCTTGACAAGATTGCTGAAGGATTGGCAAAATAA

Protein sequence :
MEDLMKKLGTLLVLFLSAIILVACASGKKDTTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDV
KKTSEADLIFYNGINLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAK
QLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQI
KTLVEKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 5e-105 78
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 7e-105 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPCG_1623 YP_001836340.1 manganese ABC transporter manganese-binding adhesion liprotein VFG1359 Protein 5e-132 99
SPCG_1623 YP_001836340.1 manganese ABC transporter manganese-binding adhesion liprotein VFG2165 Protein 2e-81 58
SPCG_1623 YP_001836340.1 manganese ABC transporter manganese-binding adhesion liprotein VFG2157 Protein 5e-76 53