Gene Information

Name : SPCG_1292 (SPCG_1292)
Accession : YP_001836009.1
Strain : Streptococcus pneumoniae CGSP14
Genome accession: NC_010582
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG4845
EC number : -
Position : 1279959 - 1280609 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence : 
ATGAACTTTAATAAAATTGATTTAGACAATTGGAAGAGAAAAGAGATATTTAATCATTATTTGAACCAACAAACGACTTT
TAGTATAACCACAGAAATTGATATTAGTGTTTTATACCGAAACATAAAACAAGAAGGATATAAATTTTACCCTGCATTTA
TTTTCTTAGTGACAAGGGTGATAAACTCAAATACAGCTTTTAGAACTGGTTACAATAGCGACGGAGAGTTAGGTTATTGG
GATAAGTTAGAGCCACTTTATACAATTTTTGATGGTGTATCTAAAACATTCTCTGGTATTTGGACTCCTGTAAAGAATGA
CTTCAAAGAGTTTTATGATTTATACCTTTCTGATGTAGAGAAATATAATGGTTCGGGGAAATTGTTTCCCAAAACACCTA
TACCTGAAAATGCTTTTTCTCTTTCTATTATTCCATGGACTTCATTTACTGGGTTTAACTTAAATATCAATAATAATAGT
AATTACCTTCTACCCATTATTACAGCAGGAAAATTCATTAATAAAGGTAATTCAATATATTTACCGCTATCTTTACAGGT
ACATCATTCTGTTTGTGATGGTTATCATGCAGGATTGTTTATGAACTCTATTCAGGAATTGTCAGATAGGCCTAATGACT
GGCTTTTATAA

Protein sequence : 
MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQEGYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYW
DKLEPLYTIFDGVSKTFSGIWTPVKNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNS
NYLLPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catA2 ACF06176.1 chloramphenicol acetyltransferase II Not tested Tn5036-like Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPCG_1292 YP_001836009.1 chloramphenicol acetyltransferase NC_010427.6155852.p0 Protein 3e-88 100
SPCG_1292 YP_001836009.1 chloramphenicol acetyltransferase NC_010426.6155849.p0 Protein 3e-88 100
SPCG_1292 YP_001836009.1 chloramphenicol acetyltransferase NC_010111.5787932.p0 Protein 1e-53 55
SPCG_1292 YP_001836009.1 chloramphenicol acetyltransferase CP001581.1.gene2168. Protein 5e-41 43
SPCG_1292 YP_001836009.1 chloramphenicol acetyltransferase CP004022.1.gene799.p Protein 6e-37 42