Gene Information

Name : SPCG_1035 (SPCG_1035)
Accession : YP_001835752.1
Strain : Streptococcus pneumoniae CGSP14
Genome accession: NC_010582
Putative virulence/resistance : Unknown
Product : Tn5252, relaxase
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3843
EC number : -
Position : 1004580 - 1006430 bp
Length : 1851 bp
Strand : +
Note : -

DNA sequence :
ATGGTAGTCACTAAGCATTTTGCGACACACGGAAAAAAATATCGTAGGCGTTTAATTAAGTATATCCTCAATCCTGATAA
AACGGACAATTTGAAATTAGTATCTGATTTTGGTATGAGCAATTACTTAGACTTTCCTAGCTATGAAGAAATGGTAGAAA
TGTACAATGTCAACTTTACCAATAATGACAAGTTGTACGAATACAGAAATGACCGACAAGAAAAACACCAACAAAATATT
CATGCCCATCACCTCATTCAATCATTTTCTCCTGAAGATAATCTGACACCTGAAGAAATTAACCGCATTGGTTATGAGAC
CATTATGGAATTAACAGGAGGCCGTTTTCGTTTCATCGTAGCGACTCATACAGACAAAGATCATATTCATAATCACATCT
TAATCAACGCCATTGACTGTAATTCAGATAAAAAGTTGATATGGAATTATGCCTTGGAACGAAACCTTCGTATGATTTCA
GACCGCATTTCTAAAATGGCTGGGGCGAAAATTATTGAAAAGCGTTTCTCTTACCGTGACTATCAAAAATATAGAGCGAC
TAGCCATAAGTTTGAACTAAAGCAACGTCTTTATTTTTTGATGCAGCAGTCAAAATCCTTTGATGATTTTTTAGAAAAAG
CAGAGCAATTACATGTTCATATTGATTTTAGTCAGAAGCATAGTCGATTCATGATGACGGATCGGGCAATGACAAAACCA
ATTCGAGGACGTCAACTCAGTAAACGAGATTTATATGATGAAGATTTTTTTAGAATGCATTTTACCAAGCAAGAGATTGC
AAGTCGTTTAGAATTTTTGTTGAACTGTGTCAATTCTTTAGAAGGGTTACTAACAAAATCAAAAGAATTGAATCTAACCA
TTGACTTAAAACAAAAAAATGTAATCTTTATACTTGAAGAAAATGGAAAGCAATTCAGTCTGAGTCATAAAAAAATAAGT
GATGAGAAATTATATGATGTCAATTTTTTTCAAGATTATTTTAAAAATAAGGAAGTAGGTGTTTCAGAAGGAATAGAAAA
TCTACAGGCACAGTACCGTGCTTTTCAAGAAGAACGAGATAAGGAGAAGGTATCTACTGAAGAAATTGAGGAAGCCTTTG
AGACATTTAAGGAAAAACGAGATGCCGTTCATGAATTTGAAGTAAAACTTACAGAACACCAAATTGAGAAGTTAGTTGAT
GAGGGAATTTATATCAAAGTGTCCTTTGGTATAAATCAGAGTGGTCTTATTTTCATTCCTAACTATCAACTGGATATTAT
GGAAGAAGAAAATCAGAAAAAATATAAAGTCTACATTCGTGAGACAACCTCATATTTTGTCTATAACAAAGAACATTCGG
ATAAGAATCAGTATATCAAAGGGAGAACCTTGATTAGGCAGCTAACCAACGATAGTCGAGTAATACCATACAGAAGACCG
ACTGTTGAAAGACTTCAAGAAAAGATTTCTGAGATTAGCCTCTTGATTGAGTTAACTGAGACAGATAAGAAATACCAAGA
CATTAAAGACAACTTGGTTTCCGAAATAGCAGAGCTAGATATAAAACTGACTCAAACAAATGAAAAAATTGCCACCTTAA
ATAAGATGGCGGAAGTACTTATCAATTCTAAGAGTGAAGGTTCGGGTAGCCAAAAACTAGCTAGGCATGAATTTTCTAAA
TTGAACATGACAGAATCAACAACTTTAGAACAAGTCAATGAAGAACTTTTGAAGTTACAACAGGAATTTGGTAATGTTCT
TGATGAGTATGAGAAAACAATAAGAAAGCTTGGACAATTATTTAAGGTTTTTGATGAGTGTATCAATAAAGAAATTATGA
ATGAAATATAA

Protein sequence :
MVVTKHFATHGKKYRRRLIKYILNPDKTDNLKLVSDFGMSNYLDFPSYEEMVEMYNVNFTNNDKLYEYRNDRQEKHQQNI
HAHHLIQSFSPEDNLTPEEINRIGYETIMELTGGRFRFIVATHTDKDHIHNHILINAIDCNSDKKLIWNYALERNLRMIS
DRISKMAGAKIIEKRFSYRDYQKYRATSHKFELKQRLYFLMQQSKSFDDFLEKAEQLHVHIDFSQKHSRFMMTDRAMTKP
IRGRQLSKRDLYDEDFFRMHFTKQEIASRLEFLLNCVNSLEGLLTKSKELNLTIDLKQKNVIFILEENGKQFSLSHKKIS
DEKLYDVNFFQDYFKNKEVGVSEGIENLQAQYRAFQEERDKEKVSTEEIEEAFETFKEKRDAVHEFEVKLTEHQIEKLVD
EGIYIKVSFGINQSGLIFIPNYQLDIMEEENQKKYKVYIRETTSYFVYNKEHSDKNQYIKGRTLIRQLTNDSRVIPYRRP
TVERLQEKISEISLLIELTETDKKYQDIKDNLVSEIAELDIKLTQTNEKIATLNKMAEVLINSKSEGSGSQKLARHEFSK
LNMTESTTLEQVNEELLKLQQEFGNVLDEYEKTIRKLGQLFKVFDECINKEIMNEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1098 YP_006309900.1 relaxase Not tested FWisland_1 Protein 0.0 84
SSU98_0919 YP_001200477.1 chromosome segregation ATPase Not tested 89K Protein 0.0 62
SSU05_0913 YP_001198279.1 chromosome segregation ATPase Not tested 89K Protein 0.0 62
SP_1056 NP_345530.1 Tn5252, relaxase Not tested PPI-1 Protein 2e-151 54