Gene Information

Name : Bind_0063 (Bind_0063)
Accession : YP_001831211.1
Strain : Beijerinckia indica ATCC 9039
Genome accession: NC_010581
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 65496 - 67340 bp
Length : 1845 bp
Strand : +
Note : PFAM: thiamine biosynthesis protein ThiC; KEGG: acr:Acry_0965 thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACATTCAGCACAAACGCTCAAGTCTCGTTCCCGAGACTGTGACCTGCGGCCCTCTGCCGGGATCGCGCAAGGTCTA
TCACCATCCTCAGAGCCATCCCGAACTCAGCGTGCCGTTCCGCGAGATCGCGCTCGATCCGGCGTCTGGCGAGCCGCCGG
TGCGCGTCTATGATGCCTCTGGTCCCTATTCGGAAGAGAATTTCAAGCCCGATCTCGCCAAGGGCCTGCCGCGCACCCGC
GCCGTCTGGCTCGAAAAACGCGCGGGCCATGAGTCCTATGCCGGACGTGCCGTCAAGCCGGAAGACAATGGCTCCGTTTC
GGCCGACCGCTTGGTGCCGCCCTGCCCGGCCAATGCCGCGCCCTTGCGCGGGCGCACCGGTGCCTTGGTGACGCAATATG
AATTCGCCAAGGCTGGCATCATTACGGAAGAAATGATCTACGCCGCCGCGCGCGAAAATCTCGGCCGCGAACAGGCCGTG
GAGGGAGCCGCCGCCCGGCTCAAGGATGGCGAAAGCTTTGGCGCCTCGATCCCCGAATTCGTGACACCGGAATTCGTGCG
CGACGAGATCGCGCGGGGCCGTGCGATCATTCCCGCCAATATCAATCATCCCGAACTCGAGCCGATGGTCATCGGCCGCA
ATTTTCTCGTGAAGGTCAATGCCAATATCGGCAATTCGGCTGTGACCTCTTCCGTTGCGGAAGAAGTCGAAAAGCTCGTC
TGGGCGATCCGCTGGGGCGCCGACACGGTCATGGACCTTTCGACCGGCCGCAACATTCACAATATCCGCGACTGGATCAT
GCGCAATGCGCCGGTGCCGATCGGCACCGTGCCGATCTATCAGGCGCTCGAAAAGGTCGACGGCGATCCGATCAAACTGA
CCTGGGAAATTTTCCGCGACACTTTGATCGAACAAGCCGAGCAGGGCGTCGATTATTTCACGATCCATGCAGGTGTCCGG
CTGGCCCATGTGCCGCTGACCGCCAAGCGCACCACGGGCATCGTCTCGCGCGGTGGCTCGATCATGGCGCGCTGGTGCCT
CGCGCATCACAAGGAAAGCTTCCTCTACGAGCATTTCGACGAGATTTGCGACATCATGCGCGCCTATGATGTCTCGTTCT
CGCTGGGCGATGGCCTGCGGCCCGGCTCGATTGCCGATGCCAATGATGCGGCGCAATTCGCCGAACTCGAAACGCTGGGC
GAATTGACCAAGATCGCCTGGGCCAAAGGCTGTCAGGTCATGATCGAAGGCCCCGGCCATGTGCCGATCCATAAGATCAA
GATCAATATGGAAAAGCAGCTCAAGGAATGCGATGAGGCGCCCTTCTATACGCTTGGGCCGCTAACGACCGATATTGCGC
CTGGCTATGATCACATCACCTCCGGCATTGGTGCGGCGATGATCGGCTGGTTCGGCTGCGCCATGCTCTGCTATGTGACG
CCGAAGGAGCATTTGGGTCTGCCCGACCGCGACGATGTGAAAGTGGGCGTGATCACCTATCGCATCGCGGCCCATGCGGG
CGATCTCGCCAAGGGCCATCCGGCGGCTCAGATCCGCGATGATGCCGTCTCGCGGGCGCGGTTCGATTTCCGCTGGCAGG
ATCAGTTCAATCTCGGCCTCGATCCGGAAACGGCGGCGCATTTCCACGATGAGACCCTGCCGAAGGACGCCCATAAGGTC
GCCCATTTCTGCTCCATGTGCGGACCGCAATTCTGCTCGATGAAGATCACCCAGGATCTGCGTGTGGAAGCCGCCGCCAT
GGCGGAAGAGGAAGCCAAGCGCGAACAGGGCATGGCCGAAAAGAGTGCCGAATTTTTGGAGAAGGGCGGCAAGCTTTACG
TATAA

Protein sequence :
MNIQHKRSSLVPETVTCGPLPGSRKVYHHPQSHPELSVPFREIALDPASGEPPVRVYDASGPYSEENFKPDLAKGLPRTR
AVWLEKRAGHESYAGRAVKPEDNGSVSADRLVPPCPANAAPLRGRTGALVTQYEFAKAGIITEEMIYAAARENLGREQAV
EGAAARLKDGESFGASIPEFVTPEFVRDEIARGRAIIPANINHPELEPMVIGRNFLVKVNANIGNSAVTSSVAEEVEKLV
WAIRWGADTVMDLSTGRNIHNIRDWIMRNAPVPIGTVPIYQALEKVDGDPIKLTWEIFRDTLIEQAEQGVDYFTIHAGVR
LAHVPLTAKRTTGIVSRGGSIMARWCLAHHKESFLYEHFDEICDIMRAYDVSFSLGDGLRPGSIADANDAAQFAELETLG
ELTKIAWAKGCQVMIEGPGHVPIHKIKINMEKQLKECDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVT
PKEHLGLPDRDDVKVGVITYRIAAHAGDLAKGHPAAQIRDDAVSRARFDFRWQDQFNLGLDPETAAHFHDETLPKDAHKV
AHFCSMCGPQFCSMKITQDLRVEAAAMAEEEAKREQGMAEKSAEFLEKGGKLYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 65
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 65
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 62