Gene Information

Name : Bind_3465 (Bind_3465)
Accession : YP_001834511.1
Strain : Beijerinckia indica ATCC 9039
Genome accession: NC_010581
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 3939035 - 3940681 bp
Length : 1647 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: csa:Csal_3002 ABC transporter related

DNA sequence :
ATGACGGCGGTGATGGCGCCAGCAACCGCATCTGGGCAGACAGACAAGCCCCTGCTCGCTTTTCGCGATCTTTCGATCAG
CTATGGCGGGCAGGCCATCGTGCGCGATCTGACCTTGTCGTTGCACCCGGGCGAGACCGCTGCCCTAGTCGGCGAATCGG
GTTCGGGCAAAAGCCAGACAGCGCTGGCAGCCTTGCGGCTTCTGCCAGAGCCGGCCAAGGTTTCCGGGCAAATCCTCTTT
GAGGGCCAGGATCTGCTCTCGCTTTCTGAGCTGGCGCTCAATCGCCTGCGTGGACGGCGCATCGCGCTGATTTTCCAAGA
GCCTATGTCGGCGCTCGATCCGCTGTTTCCGGTCGGCGCGCAGATCGGTGTGATCCTGCGCCATCATCTCGGTCTCAGCC
GCCGCGCCGCTTTGACCCGCGCCTGCGAATTGCTCGACCAAGTGGGCATTCCCGACCCCCAGCGGCGCGTAAAGGCCTAT
CCGCATGAATTATCGGGTGGTCAGCGCCAACGTGTCGCCATTGCCATGGCGATTGCTTGCGAACCCGCGGTGCTCATCGC
CGACGAACCAACGACGGCGCTCGACGTGACGCTCGCCGCCCGCATTCTCGATCTCATCGAGGACTTGAAGCAAAGACTTG
GCATGGCGCTCTTATTCATCAGCCATGATCTCGGCCTGGTGCGGCGCATCGCCGATAGCGTCCATGTCATGCATCAGGGG
AGAATCGTCGAAAGCGGTCCCGCCCGGGAGATCATTCACCATCCGCGTGAGGCTTATACGCGCCTGCTGCTCGGCGCGGC
GCCGCGCCCCCGCTTGCGGCCACATCCTCTCGAAGCCAAAAATCTTCTCGAGGCCCGAGATCTTACTGTGCGTTTCAAGC
GGCGCGGCACGCTCGGCTTGCCCTCTTTTGGTCTTTTTCGACCGCGTGAAAAAGATTTCACCGCCGTCGATCATGTGAAT
CTCACCTTGCGACAGGGCGAGACTTTTGGGCTCGTCGGAGAATCGGGTTCAGGCAAATCGACCCTGGCTCGGGCTTTGTT
GCGGCTGGTGCCGGCCTCGGGCTCGATTCTATTCGAGGGGCGCGATCTCGTCGCCCTCCAACCCCGCGCCCTGCGGCCCT
TCCGCCATGCGATGCAGATCGTCTTTCAAGATCCCTATCAGGCCTTGTCGCCACGCATGCGCATCGGTGCCATCATCACC
GAAGGCCTCCGTATTCATGAGCCGGGTTTGAACGCACAAGCCCTGGATGCGCGCGCGGCTTTTGCCCTGCAGGAGGTCAA
ACTCGACCCCGCTCTTCGCCACAGGTTCCCTGCCGAATGTTCCGGCGGACAGCGTCAACGCATCGCCATCGCCCGAGCCA
TGATTCTGCGGCCGAAACTTTTGCTGCTCGATGAACCGACGTCCGCGCTCGACCGCTCCGTGCAAGCGGAGATCCTGGAA
TTGCTCAGCCTTTTGCAGGCAAGCCATGGCCTGACCTATCTCTTCATCAGCCATGATTTCGGCGCCGTGCGCGCCATGGC
CGACACGATCGGCGTCATGCGGATGGGCCATTTGGTGGAAAGCGGTCCAGCGGAGGAGATTCTCACACGACCGAGGATGG
ATTACACGAGCGAACTGATCGCGGCGGCCTTTCCGGCTGAATCCTGA

Protein sequence :
MTAVMAPATASGQTDKPLLAFRDLSISYGGQAIVRDLTLSLHPGETAALVGESGSGKSQTALAALRLLPEPAKVSGQILF
EGQDLLSLSELALNRLRGRRIALIFQEPMSALDPLFPVGAQIGVILRHHLGLSRRAALTRACELLDQVGIPDPQRRVKAY
PHELSGGQRQRVAIAMAIACEPAVLIADEPTTALDVTLAARILDLIEDLKQRLGMALLFISHDLGLVRRIADSVHVMHQG
RIVESGPAREIIHHPREAYTRLLLGAAPRPRLRPHPLEAKNLLEARDLTVRFKRRGTLGLPSFGLFRPREKDFTAVDHVN
LTLRQGETFGLVGESGSGKSTLARALLRLVPASGSILFEGRDLVALQPRALRPFRHAMQIVFQDPYQALSPRMRIGAIIT
EGLRIHEPGLNAQALDARAAFALQEVKLDPALRHRFPAECSGGQRQRIAIARAMILRPKLLLLDEPTSALDRSVQAEILE
LLSLLQASHGLTYLFISHDFGAVRAMADTIGVMRMGHLVESGPAEEILTRPRMDYTSELIAAAFPAES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-65 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-65 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-65 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-65 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-87 43