Name : Bind_3465 (Bind_3465) Accession : YP_001834511.1 Strain : Beijerinckia indica ATCC 9039 Genome accession: NC_010581 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 3939035 - 3940681 bp Length : 1647 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: csa:Csal_3002 ABC transporter related DNA sequence : ATGACGGCGGTGATGGCGCCAGCAACCGCATCTGGGCAGACAGACAAGCCCCTGCTCGCTTTTCGCGATCTTTCGATCAG CTATGGCGGGCAGGCCATCGTGCGCGATCTGACCTTGTCGTTGCACCCGGGCGAGACCGCTGCCCTAGTCGGCGAATCGG GTTCGGGCAAAAGCCAGACAGCGCTGGCAGCCTTGCGGCTTCTGCCAGAGCCGGCCAAGGTTTCCGGGCAAATCCTCTTT GAGGGCCAGGATCTGCTCTCGCTTTCTGAGCTGGCGCTCAATCGCCTGCGTGGACGGCGCATCGCGCTGATTTTCCAAGA GCCTATGTCGGCGCTCGATCCGCTGTTTCCGGTCGGCGCGCAGATCGGTGTGATCCTGCGCCATCATCTCGGTCTCAGCC GCCGCGCCGCTTTGACCCGCGCCTGCGAATTGCTCGACCAAGTGGGCATTCCCGACCCCCAGCGGCGCGTAAAGGCCTAT CCGCATGAATTATCGGGTGGTCAGCGCCAACGTGTCGCCATTGCCATGGCGATTGCTTGCGAACCCGCGGTGCTCATCGC CGACGAACCAACGACGGCGCTCGACGTGACGCTCGCCGCCCGCATTCTCGATCTCATCGAGGACTTGAAGCAAAGACTTG GCATGGCGCTCTTATTCATCAGCCATGATCTCGGCCTGGTGCGGCGCATCGCCGATAGCGTCCATGTCATGCATCAGGGG AGAATCGTCGAAAGCGGTCCCGCCCGGGAGATCATTCACCATCCGCGTGAGGCTTATACGCGCCTGCTGCTCGGCGCGGC GCCGCGCCCCCGCTTGCGGCCACATCCTCTCGAAGCCAAAAATCTTCTCGAGGCCCGAGATCTTACTGTGCGTTTCAAGC GGCGCGGCACGCTCGGCTTGCCCTCTTTTGGTCTTTTTCGACCGCGTGAAAAAGATTTCACCGCCGTCGATCATGTGAAT CTCACCTTGCGACAGGGCGAGACTTTTGGGCTCGTCGGAGAATCGGGTTCAGGCAAATCGACCCTGGCTCGGGCTTTGTT GCGGCTGGTGCCGGCCTCGGGCTCGATTCTATTCGAGGGGCGCGATCTCGTCGCCCTCCAACCCCGCGCCCTGCGGCCCT TCCGCCATGCGATGCAGATCGTCTTTCAAGATCCCTATCAGGCCTTGTCGCCACGCATGCGCATCGGTGCCATCATCACC GAAGGCCTCCGTATTCATGAGCCGGGTTTGAACGCACAAGCCCTGGATGCGCGCGCGGCTTTTGCCCTGCAGGAGGTCAA ACTCGACCCCGCTCTTCGCCACAGGTTCCCTGCCGAATGTTCCGGCGGACAGCGTCAACGCATCGCCATCGCCCGAGCCA TGATTCTGCGGCCGAAACTTTTGCTGCTCGATGAACCGACGTCCGCGCTCGACCGCTCCGTGCAAGCGGAGATCCTGGAA TTGCTCAGCCTTTTGCAGGCAAGCCATGGCCTGACCTATCTCTTCATCAGCCATGATTTCGGCGCCGTGCGCGCCATGGC CGACACGATCGGCGTCATGCGGATGGGCCATTTGGTGGAAAGCGGTCCAGCGGAGGAGATTCTCACACGACCGAGGATGG ATTACACGAGCGAACTGATCGCGGCGGCCTTTCCGGCTGAATCCTGA Protein sequence : MTAVMAPATASGQTDKPLLAFRDLSISYGGQAIVRDLTLSLHPGETAALVGESGSGKSQTALAALRLLPEPAKVSGQILF EGQDLLSLSELALNRLRGRRIALIFQEPMSALDPLFPVGAQIGVILRHHLGLSRRAALTRACELLDQVGIPDPQRRVKAY PHELSGGQRQRVAIAMAIACEPAVLIADEPTTALDVTLAARILDLIEDLKQRLGMALLFISHDLGLVRRIADSVHVMHQG RIVESGPAREIIHHPREAYTRLLLGAAPRPRLRPHPLEAKNLLEARDLTVRFKRRGTLGLPSFGLFRPREKDFTAVDHVN LTLRQGETFGLVGESGSGKSTLARALLRLVPASGSILFEGRDLVALQPRALRPFRHAMQIVFQDPYQALSPRMRIGAIIT EGLRIHEPGLNAQALDARAAFALQEVKLDPALRHRFPAECSGGQRQRIAIARAMILRPKLLLLDEPTSALDRSVQAEILE LLSLLQASHGLTYLFISHDFGAVRAMADTIGVMRMGHLVESGPAEEILTRPRMDYTSELIAAAFPAES |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-65 | 43 |
oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-65 | 43 |
cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-65 | 43 |
oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-65 | 43 |
dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-87 | 43 |