Gene Information

Name : Bind_3361 (Bind_3361)
Accession : YP_001834407.1
Strain : Beijerinckia indica ATCC 9039
Genome accession: NC_010581
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 3814525 - 3816177 bp
Length : 1653 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1933 ABC transporter related

DNA sequence :
ATGAACACACCAATGAGTGCCTCGACTCCGCTGCTCACCGTCGAAAACCTGTCGATCGCTTTTCGCCAAGGGAGCCTCGA
AAAAGGGGCGCGCGAGACGCGTGTCGTTTCGGATGTCTCCTTTACCCTCGCGCCAGGGCGCACTTTGGCGCTCGTCGGGG
AATCGGGTTCCGGCAAATCGGTGACGGCGCTCTCCCTGGTGCGGCTCCTCGGCGCGAATGCCCATATCCAGGGCCGCGCC
TTGTTCAAGGACAGAGATCTCTTCGCCTGCACGGAATCGGAGCTGCGAAAGTTACGCGGCGGCGCGATCACCATGGTGTT
CCAGGAGCCGATGACCTCGCTTAACCCGCTCCATAAGGTCGAGCATCAGATCGGCGAAATTCTCTCCTTGCACGGCATGC
GTGGAGAGAAAGCGATCCGCGCCCATGTGATCGAACTTTTGGAGGAAGTCGGCATTCGCGACGCGGAAAGCCGATTGTCT
TCCTATCCGCATCAGCTTTCCGGCGGCCAACGTCAGCGTGTCATGATCGCGATGGCGCTCGCCAACCGCCCGGATCTTCT
GATCGCCGATGAGCCGACGACCGCTCTCGACGTCACCGTCCAGGCCCAAATCCTTACCCTTCTCCAAAACCTGCAGCGCA
AGCATGGCATGGCCATGCTGTTCATCACCCATGATCTTGGGATCGTGCGCAAGATCGCCGATGATGTGGCGGTGATGTGC
AAGGGCGAAATCGTCGAGGCGAAGCCCGCGGCCGCATTATTCGCGGCGCCGCGCCATTCCTATACACGCGCTTTGCTCGC
CGCCGAGCCGAAGGGCACGGCGCCGCCCGACGATTCATCCAAACCGGTTCTCGTTAAGACCGACAATCTCCGCGTCTGGT
TTCCCATCAAGCGCGGCCTGCTGCGGCGGACGATCGGCCATGTCAAGGCAGTCGATGGCGTCAGCCTGACATTGCGCGAG
GGCCAGACCGTCGGTGTCGTCGGGGAATCAGGCTCGGGCAAGACGACGCTCGGCCTTGCGCTTTTGCGGCTCATTTCCTC
GCAAGGCCCGATCGTCTTTCTCGGCCAGCGGATCGATGGTTTGCGCAATATTGCCATGCGGCCCTTACGGGCCGAGATGC
AGATCGTGTTTCAGGACCCTTATGGTTCCTTGTCACCACGTCTTTCGGTCGGTGACATTGTCGCCGAGGGATTGGGCCTC
AAGAACCACCGTCTTTCAATCACAGAACGACGCGAGACGGTCGCCCGGGCTCTGGCCGATACGGGCCTTGATCCGGCAAC
CATGGATCGTTACCCGCATGAATTTTCCGGCGGCCAACGCCAGCGCATCGCCATCGCGCGGGCCATGGTCCTCGCGCCGA
AATTCGTGATGCTGGATGAGCCGACCTCGGCGCTCGACATGTCGGTTCAGGCACAAATCGTCGATCTTCTGCGCGACCTC
CAGGCCAAACGCGGCCTCGCCTATCTGTTTATCAGTCATGATCTGAAAGTGGTGCGTGCCCTCGCCAACGACATCATCGT
GATGCGCCAGGGCAGGGTCGTCGAACAAGGCCCGGCACATACAGTGCTGACGCAGCCGAAAGATGCCTATACGCAAGCGC
TGTTTGCCGCTGCTTTCGATATCGAGGCGTCACACAACAACAACACCTTATAA

Protein sequence :
MNTPMSASTPLLTVENLSIAFRQGSLEKGARETRVVSDVSFTLAPGRTLALVGESGSGKSVTALSLVRLLGANAHIQGRA
LFKDRDLFACTESELRKLRGGAITMVFQEPMTSLNPLHKVEHQIGEILSLHGMRGEKAIRAHVIELLEEVGIRDAESRLS
SYPHQLSGGQRQRVMIAMALANRPDLLIADEPTTALDVTVQAQILTLLQNLQRKHGMAMLFITHDLGIVRKIADDVAVMC
KGEIVEAKPAAALFAAPRHSYTRALLAAEPKGTAPPDDSSKPVLVKTDNLRVWFPIKRGLLRRTIGHVKAVDGVSLTLRE
GQTVGVVGESGSGKTTLGLALLRLISSQGPIVFLGQRIDGLRNIAMRPLRAEMQIVFQDPYGSLSPRLSVGDIVAEGLGL
KNHRLSITERRETVARALADTGLDPATMDRYPHEFSGGQRQRIAIARAMVLAPKFVMLDEPTSALDMSVQAQIVDLLRDL
QAKRGLAYLFISHDLKVVRALANDIIVMRQGRVVEQGPAHTVLTQPKDAYTQALFAAAFDIEASHNNNTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-81 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-81 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-81 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-81 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-91 42