Gene Information

Name : Bind_3342 (Bind_3342)
Accession : YP_001834389.1
Strain : Beijerinckia indica ATCC 9039
Genome accession: NC_010581
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3797224 - 3798702 bp
Length : 1479 bp
Strand : -
Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: spe:Spro_3095 succinic semialdehyde dehydrogenase

DNA sequence :
ATGGCGGACGAGGCTTTTCTGGCCACGCTCAAGGATGCTTCTCTCTTCCGCCAGGCGTGTCTCATTGATGGCCGCTGGCT
CAGCGTGGGCGATGGGCCTTCTGTCACGGTTGAGAATCCGGCAACGGGCACTGTGCTCGGCCATGTGCCCGCCTTCGGCG
CCAAGGAAACCGCGCTGGCCATTGCTGCCGCGAAAAAGGCGCAGCCGGCCTGGGCCAAAAAAACCGCAAAGGAACGCGCC
AAGATCCTGCGGCACCTGTTCGACCTGATGCTCGAAAACCAGGAGGATCTTGCTCGCATCATGACAGCAGAACAGGGCAA
GCCCCTGACCGAGAGCCGGGGTGAAATCGCCTATGCGGCGGGCTTCATCGAATGGTTCGCGGAGGAAGGCAAACGCGTCT
ATGGCGATGTCATTCCCGAACATCTGCCCGGCCGCCGCTTGATCGTCCGCAAGGAGCCGATCGGCGTCTTCGCCGCCATC
ACGCCCTGGAATTTTCCATCAGCCATGATCACCCGCAAGGCGGGTCCCGGTTGGGCTGCGGGCTGCGCCGGCATTTTGCG
CCCGGCGAGCCAGACGCCCTTTTCAGCCCTGGCGCTTGGCGTGCTCGCTGAACGGGCCGGCCTGCCGGCGGGTATCTGCA
ACATCGTCACGGGGCCTGGAAGCGAGATTGGCGCTGAACTCACCGGCAATCCGGATGTGCGCAAATTCTCCTTTACCGGC
AGCACGGAAGTGGGCGCGAAATTGCTCGCCCAATGCGCGCCTACAATCAAGAAGACCAGTATGGAACTTGGCGGCAATGC
GCCTTTCATCGTCTTCGACGATGCCGATCTCGATGCCGCCGTCAAAGGGGCCATCGCCTCGAAATATCGTAATGCCGGAC
AAACCTGTGTCTGTGCCAACCGTCTGCTGGTCCAGGATGGCGTTTATGATGTTTTTGCACAAAAGTTGGTGGAGGCCGTC
AAGGCTCTGAAGGTCGGCGACGGGTTCGAGGAGGGCGTCATCATTGGTCCGCTAATCGATCAGGCGGCTCTGACCAAGGT
CGACGCGCATGTGGCTGATGCTGTTTCCCTCGGCGCCTCCGTGATCCTCGGCGGCGCGCCGCATCCGCTTGGTGGCACTT
TCTATGAGCCGACGATCCTTGCCGATGTCCCGCCCAAGGCGCGGATTTTTCACGAGGAAACTTTTGGGCCGGTCGCGCCC
TTGTTTCGCTTCCGCACGGAAGAAGAGGCGGTGACACTGGCCAATGACACACCCTTTGGCCTTGCCTCCTATTTCTATAG
CCGCGACATCGGCCGCATCATGCGGGTGGCGGAAGGACTCGAATATGGCATTGTTGGGATCAACGAAGGATTGATCTCGA
CGGAGGTCGCGCCGTTCGGTGGTGTGAAAAACTCGGGGATCGGGCGGGAAGGGTCGAAATATGGCATCGAGGACTATCTG
GAGATCAAATATCTCTGCCTCGGCGGGCTCGAGACCTGA

Protein sequence :
MADEAFLATLKDASLFRQACLIDGRWLSVGDGPSVTVENPATGTVLGHVPAFGAKETALAIAAAKKAQPAWAKKTAKERA
KILRHLFDLMLENQEDLARIMTAEQGKPLTESRGEIAYAAGFIEWFAEEGKRVYGDVIPEHLPGRRLIVRKEPIGVFAAI
TPWNFPSAMITRKAGPGWAAGCAGILRPASQTPFSALALGVLAERAGLPAGICNIVTGPGSEIGAELTGNPDVRKFSFTG
STEVGAKLLAQCAPTIKKTSMELGGNAPFIVFDDADLDAAVKGAIASKYRNAGQTCVCANRLLVQDGVYDVFAQKLVEAV
KALKVGDGFEEGVIIGPLIDQAALTKVDAHVADAVSLGASVILGGAPHPLGGTFYEPTILADVPPKARIFHEETFGPVAP
LFRFRTEEEAVTLANDTPFGLASYFYSRDIGRIMRVAEGLEYGIVGINEGLISTEVAPFGGVKNSGIGREGSKYGIEDYL
EIKYLCLGGLET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-138 63