Gene Information

Name : Bind_2236 (Bind_2236)
Accession : YP_001833343.1
Strain : Beijerinckia indica ATCC 9039
Genome accession: NC_010581
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2564713 - 2565396 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver

DNA sequence : 
ATGCGCATTCTTATCGTTGAGGACGATCCTGAAGCCTCTCAATATATGGTCAAGGCCTTTCGCGAGGCCGGCCACCTCGC
CGATCATGCAGGCGATGGCCTTGCTGGCTATCAAAAGGCTTGTGAGGAGAATTATGACGTCCTGATCGTTGATCGCATGC
TGCCCAAACTCGATGGTTTGTCCCTGATCGGCGGTTTACGCGCCCAAAAGATCGAGACCCCTGTCCTGATCCTGTCTGCG
CTCGGCCAGGTCGATGACAGGGTGAAGGGCCTGCGCTCCGGCGGCGACGATTATCTGCCGAAACCCTATGCCTTTTCCGA
ATTGCTCGCGCGCGTGGAAGCACTCGCCCGCCGCAAGCCGCCGGGCACGGCCGAGGAGACCATCTATCGCATCGGCGGGC
TCGAACTCGACCGCCTCGCGCATAAGCTGACCCGCGACGGCAAGGAAATCATTCTGCAACCGCGTGAATTTCGCCTGCTC
GAATATTTGATGAAACATGCCGGCCAGGTCGTGACACGCACCATGTTGCTCGAACATGTCTGGGATTATCATTTCGATCC
GCAGACCAATGTCATTGACGTGCATATTTCCCGGCTACGCTCCAAGATTGACAAAGGCTTCGATCCACCACTCCTGCAAA
CCATCCGCGGCATAGGATATATGATCCGTGACAGCGATCATTAA

Protein sequence : 
MRILIVEDDPEASQYMVKAFREAGHLADHAGDGLAGYQKACEENYDVLIVDRMLPKLDGLSLIGGLRAQKIETPVLILSA
LGQVDDRVKGLRSGGDDYLPKPYAFSELLARVEALARRKPPGTAEETIYRIGGLELDRLAHKLTRDGKEIILQPREFRLL
EYLMKHAGQVVTRTMLLEHVWDYHFDPQTNVIDVHISRLRSKIDKGFDPPLLQTIRGIGYMIRDSDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-40 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bind_2236 YP_001833343.1 two component transcriptional regulator BAC0083 Protein 8e-47 47
Bind_2236 YP_001833343.1 two component transcriptional regulator BAC0197 Protein 2e-46 47
Bind_2236 YP_001833343.1 two component transcriptional regulator BAC0125 Protein 8e-47 46
Bind_2236 YP_001833343.1 two component transcriptional regulator BAC0111 Protein 1e-53 46
Bind_2236 YP_001833343.1 two component transcriptional regulator BAC0347 Protein 1e-48 45
Bind_2236 YP_001833343.1 two component transcriptional regulator BAC0638 Protein 2e-40 45
Bind_2236 YP_001833343.1 two component transcriptional regulator BAC0308 Protein 2e-43 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bind_2236 YP_001833343.1 two component transcriptional regulator VFG0596 Protein 2e-40 42
Bind_2236 YP_001833343.1 two component transcriptional regulator VFG1389 Protein 4e-36 42