Gene Information

Name : Bind_1097 (Bind_1097)
Accession : YP_001832228.1
Strain : Beijerinckia indica ATCC 9039
Genome accession: NC_010581
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1260572 - 1262617 bp
Length : 2046 bp
Strand : +
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGCTTTCCTCGAGTCACGCTTTGAGCCACGCTGTGCCAAAGCACCCTCTCAATTTTAGCCGTGCCGCCCTCGATGCCTT
CCGCAAGCTCGATCCGCGTGCCCTAACGGGCAATCCGGTGATCCTGACGACCGAGATTGTTGCCTTTCTCTCGACCGTCT
CGGCTGTTGCCGCGATCAGTGCCGGAACATCCGCCGTCTTCATTCTCCAGATCGCCCTCTGGCTCTGGGCGACCGTGCTT
TTCGCGAATTTTGCGGAAGCCGTCGCCGAAGGGCGTGGCAAGGCGCAGGCCGATGCGCTTCGCGCCACGCGCGTGACGAC
GATCGCGAAAGTCATCGTCGATGAGGCGAAGGGTTTCATCGTACCGCTCCCGGTGAATGAACTATTGCCCGGTGCCATCG
TTTTGGTCGAGGCGGGCGATGTCATTCCAGCGGATGGCGAAATCATTGAGGGTGTCGCTTCGGTGAATGAAGCTGCCATT
ACGGGCGAGTCGGCGCCGGTGATCCGCGAAAGCGGTGGCGATCGCTCCGCCGTGACGGGTGGCACGACGGTCATATCGGA
CTGGATCAAGGTGAGGATCACCTCGCAGCCTGGGTCCACTTTTCTCGACCGCATGATCGCCATGGTCGAAGGCGCGGACC
GGCGCAAGACGCCGAACGAGATCGCGCTGGCCGTGCTTTTGGCTGGTTTGACGCTGATCTTCCTCATCGCCGTGGTAAGC
TTGGTCGGTCTTGGTCATTATTCCGGGGTCGATCTCAACCCCGTCGTGCTGGGCGCGCTTTTCGTGACGCTGATCCCCAC
GACCATTGGCGGCTTGCTCAGCGCGGTGGGCATTGCCGGCATGGACCGCCTGCTCAAGGTCAATGTTCTCGCAACCTCCG
GGCGTGCCGTGGAAGCGGCCGGTGACATCGACACGCTTCTGCTCGACAAGACCGGCACCATTACCTTTGGCAATCGCATG
GCGACGGAGGTGATTCCAACGCCCGGCCTTCGCGCGGAGGTGGCGATGCGCGCGGCCCTGATGGCGTCCTTGGCGGATGA
GACGCCGGAAGGCCGCTCGATCATCACTTTGGCAGGCCAGCAAGGCGTCACAGCCGAAATGCCCGTCGGCGCCAAGGCGA
TCGCTTTTAGCGCACATACCCGCCAGTCCGGCCTCGAGGCCGAAGGGCAGGTCTGGCGCAAGGGCGCGGTGGACGCCGTC
CTCAAGGATCTCCATCTCGATGAAACGATGCTGCCAACGGCCTTCAGGGCATCGGTGGAGCGGATCGCCCGTTCAGGCGG
CACGCCGCTCGCTGTCGCCGAGAATGGCAAACTGGTGGGGGTGATCCACCTCAAGGATGTCGTCAAACCGGGCGTCAAGG
AACGCTTTGCCGACCTGCGCCGCATGGGTGTGCGCACGGTCATGATCACGGGTGATAATCCGATCACAGCCGCCGCCATC
GCTTCGGAATCTGGTGTCGATGATTTTCTTGCCGAGGCCACGCCCGAGGATAAATTGCGGATGATCAATGCCGAACAGGG
CAAGGGACGCCTCGTTGCCATGTGTGGTGACGGTGCCAATGATGCCCCAGCTCTGGCCCAGGCCGATGTCGGTGTCGCCA
TGCAGACTGGCGCGCAAGCCGCCCGGGAAGCTGGCAATATGGTCGATCTCGACAGTGATCCGACCAAGATCATCGAGATC
GTGGAAGTCGGCAAACAGCTTCTCATCACACGCGGCGCACTGACGACCTTTTCCATCGCCAATGATGTCGCGAAATATTT
CGCGATCATTCCGGCCATGTTCGTGGTGTCCCTGCCGGCGCTCGGTAGCTTGAACATCATGGGGCTCGCAAGTCCTCAAA
GCGCGATCCTCTCCGCCGTGATTTTCAATGCGATCATCATCGTCATGCTGATTCCGCTGGCCCTGAGGGGTGTCCGCTAT
CGCGCCATTGGCGCTGGCCGGTTGCTGGCCCGCAATCTTCTTCTCTATGGCGCGGGTGGCCTTGTCGCTCCCTTCATCGG
TATCAAAACGATCGACCTGATCCTTTCGGCGATCGGCTTTGTTTGA

Protein sequence :
MLSSSHALSHAVPKHPLNFSRAALDAFRKLDPRALTGNPVILTTEIVAFLSTVSAVAAISAGTSAVFILQIALWLWATVL
FANFAEAVAEGRGKAQADALRATRVTTIAKVIVDEAKGFIVPLPVNELLPGAIVLVEAGDVIPADGEIIEGVASVNEAAI
TGESAPVIRESGGDRSAVTGGTTVISDWIKVRITSQPGSTFLDRMIAMVEGADRRKTPNEIALAVLLAGLTLIFLIAVVS
LVGLGHYSGVDLNPVVLGALFVTLIPTTIGGLLSAVGIAGMDRLLKVNVLATSGRAVEAAGDIDTLLLDKTGTITFGNRM
ATEVIPTPGLRAEVAMRAALMASLADETPEGRSIITLAGQQGVTAEMPVGAKAIAFSAHTRQSGLEAEGQVWRKGAVDAV
LKDLHLDETMLPTAFRASVERIARSGGTPLAVAENGKLVGVIHLKDVVKPGVKERFADLRRMGVRTVMITGDNPITAAAI
ASESGVDDFLAEATPEDKLRMINAEQGKGRLVAMCGDGANDAPALAQADVGVAMQTGAQAAREAGNMVDLDSDPTKIIEI
VEVGKQLLITRGALTTFSIANDVAKYFAIIPAMFVVSLPALGSLNIMGLASPQSAILSAVIFNAIIIVMLIPLALRGVRY
RAIGAGRLLARNLLLYGAGGLVAPFIGIKTIDLILSAIGFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-156 57
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-156 57
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 7e-139 53
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-138 53
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-138 53
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-138 53
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-138 53
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-139 53