Gene Information

Name : Bind_3893 (Bind_3893)
Accession : YP_001830910.1
Strain :
Genome accession: NC_010578
Putative virulence/resistance : Resistance
Product : ABC transporter related
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 25774 - 26502 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_3321 ABC transporter related

DNA sequence : 
ATGAAACAGCCGGTCGTCATTGCCTCCAACATCACGCATACATTCGGCTCCAGCACCACACGTTTCACGGTGCTGCGAGA
GATCGATCTCAAGATTTATACCAACGAGGTGTTAATGCTCGTGGGTCCATCCGGCAGTGGCAAGACCACGCTGCTCAATA
TCCTCGGCTGCCTTCTCAAGCCGACCGCAGGGATCATCGATCTGCGTGGGAAAACGACACAATCGCTCAACGAGGAGCAA
CTTGCCTCGCTGCGGTTGCAACATTTCGGCTTTGTTTTTCAAGCTTATAATTTGTTTCCCGTGCTCACGGCCACGGAAAA
CGTCATGGTCACGCTCGATCTCCTGGGGGTGAAGAGACGCGCCGCCCAGGAACGCGCGCATGAGCTTCTGAAACTCGTGG
GCCTCGGACACCGTCTTGATAGCTATCCCGCGCAGCTCAGCAGCGGCCAGAAACAGCGCGTCGCAATCGCCCGCGCCCTT
GCCAGCGATCCGCCCATCCTCATGGCCGATGAGCCGACCGCTGCCCTCGATGCCGAGACAGGCCTCAAGGCCATGGAACT
CTTCTGTATGCTGGCTCATCACCAGCATCGCGCCGTTGTCATCGTGACACATGATCCCCGAATTTTTCCTTTCGCAGATC
GCGTCGTGCATCTCGAGGACGGTCGCATTGTCGAGCGTTCAAGTATTCTTCCAGATTCTCAAAGTCTTACAATGGGACAT
TCGTCATGA

Protein sequence : 
MKQPVVIASNITHTFGSSTTRFTVLREIDLKIYTNEVLMLVGPSGSGKTTLLNILGCLLKPTAGIIDLRGKTTQSLNEEQ
LASLRLQHFGFVFQAYNLFPVLTATENVMVTLDLLGVKRRAAQERAHELLKLVGLGHRLDSYPAQLSSGQKQRVAIARAL
ASDPPILMADEPTAALDAETGLKAMELFCMLAHHQHRAVVIVTHDPRIFPFADRVVHLEDGRIVERSSILPDSQSLTMGH
SS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bind_3893 YP_001830910.1 ABC transporter related NC_008702.1.4606598. Protein 4e-27 43
Bind_3893 YP_001830910.1 ABC transporter related NC_012469.1.7686878. Protein 1e-34 41