Gene Information

Name : XfasM23_0349 (XfasM23_0349)
Accession : YP_001829071.1
Strain : Xylella fastidiosa M23
Genome accession: NC_010577
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 446054 - 446776 bp
Length : 723 bp
Strand : +
Note : KEGG: xom:XOO_2181 ABC transporter ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAATGAGCGCAGTACTCCCCAGGCATTGACCGGCCCGGTGATTCGAGCCGAGTCCCTTGGAAAAACCTATTCTGAGGG
TAAGTTACTGACCCAAGTGTTTGATGGGCTGGATTTGCAAGTTATGCGTGGCGAGACGGTGGCGATTGTTGGTGCCTCTG
GTGCTGGTAAAAGCACGCTGCTGCATTTACTGGGCGGACTCGACGTTCCAACTGCGGGTGAAGTGTACGTCGCTGGGCAA
CGTATGTCGGCCTTGTCTGATGGGGATCGTGGTCGCTTACGTAACAAAACATTGGGGTTTATCTACCAGTTCCATCACTT
GTTGCCGGAATTTACTGCATTGGAGAATGTGATGATGCCGGTGTTGTTGTCTGGTCAGAGTGTATGCAGCGCTAAGATGC
GCGCACAGATGTTGTTGGAAGCGGTCGAATTGGGGCATCGTCTGAATCACAAGCCAAGTGAGCTATCCGGGGGTGAACGG
CAACGTGCTGCGGTTGCGCGGGCTTTGGCCAATTCTCCTGATTGTGTGCTTGGGGATGAGCCGACCGGAAATCTCGACAA
TCGTACCGCCAGCACGGTGTTTGAATTGATGCTCGAACTCAATCGTGCGCAGCGAACCAGTTTGGTACTGGTGACACATG
ATCGCGGCTTGGCAAGATGCCTGGATCGGGTACTGGAGTTGTATCAAGGTGGTTTGCGCGAATTGACCTCAGCAGAAGTC
TGA

Protein sequence : 
MNERSTPQALTGPVIRAESLGKTYSEGKLLTQVFDGLDLQVMRGETVAIVGASGAGKSTLLHLLGGLDVPTAGEVYVAGQ
RMSALSDGDRGRLRNKTLGFIYQFHHLLPEFTALENVMMPVLLSGQSVCSAKMRAQMLLEAVELGHRLNHKPSELSGGER
QRAAVARALANSPDCVLGDEPTGNLDNRTASTVFELMLELNRAQRTSLVLVTHDRGLARCLDRVLELYQGGLRELTSAEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XfasM23_0349 YP_001829071.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 3e-38 43
XfasM23_0349 YP_001829071.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 2e-37 41