Gene Information

Name : XfasM23_1303 (XfasM23_1303)
Accession : YP_001829998.1
Strain : Xylella fastidiosa M23
Genome accession: NC_010577
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1432145 - 1434463 bp
Length : 2319 bp
Strand : +
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: xcb:XC_1964 transcription-related protein

DNA sequence :
ATGCAAAACAGCCTCCTCACCCAGCATATTGCTCAGATCATTGCCACTGAGATCTCCTCACAGCCCACCCAAGCACGCGC
AGCCATCGCCTTGCTTGATGAAGGCGCAAGTGTCCCCTTCATCGCACGCTACCGTAAAGAAGCCACCGGCGGCCTGGATG
ACACCCAATTACGCACCCTCGAAACCCGATTAACCTACCTACGCGAACTGGAAGAACGCCGCTCAGCCATCCTCGCCAGC
ATCACCGAACAAGGCAAACTGAACGACCTCATACACGCCGAGATCCTCGCTGCCGACACCAAATCGCGTTTGGAGGACCT
CTATCTCCCATACAAACCCAAGCGCCGCACCCGCGCACAGATCGCACGCGAAGCAGGCTTAGAACCATTAGCCGATAGCC
TACTGACTGACCCCACACTGATTCCAGAGACCGTTGCCGCCAACTTTGTCGACCCTGAGAAAGGGATCACCGACATCAAA
ACCGCACTTGAAGGCGCACGTGCGATCCTGATAGAGCGCTGGGGAGAAGATGCCGCTCTGATCGGTGAACTACGTCAATG
GCTCACCAACAATGGAGTGATTCATGCACGCCTCATCGACAACAAAGAAGACACTGGAGCCAAATACAGAGACTACTTCA
ACCATACCGAAGTGCTCTCCAAAATTCCCTCACACCGCCTGCTCGCATTGTTCCGCGCGCGCTCTGAAGAAATACTGCAT
TTAGACCTAGATCCCGGTAATGATGCTGACGCTGGCCATCAATACTGTGAAAGCATGGTCATGCAAGCCGCATGTGTCGC
TGACCAAGGGCGCCCAGCGGATACATGGTTAATGACCGCCTGCCGCCTCACCTGGCGTGCCAAACTTCATATGCATTTGA
TGTTGGACCTCTTCAACCAAGCACGAGAAAAAGCCGAAGCAGAAGCAATCACTGTATTCAGCAATAACCTCAAAGATCTC
CTGCTAGCCGCACCGGCTGGACCACGCATCGTTCTGGGGATTGATCCAGGCATCCGCACCGGCTGCAAAATCGCTATCGT
CGACACCACCGGCAAACTGATCGCAACAGAAACAATCTACCCGCACGAGCCGCGGCGCGAGTGGGACAAATCACTACACA
CCCTAAAGACACTCTGCACCCAACATCACGTCACACTGATTGCCATTGGCAATGGCACCGCAAGCCGCGAGACCGACAAA
CTAGTAAGCGACCTGATCAAAGCGCATCCTGCATTGAAACTGCAAAAAATCGTTGTCAGCGAATCAGGAGCCTCCGTCTA
TTCTGCCTCCGAATCCGCCGCTAAAGAATTCCCCAACCTGGATGTCTCCTTACGCGGCGCCGTCTCAATTGCACGCCGCC
TCCAAGATCCGCTAGCTGAACTAGTTAAAATCGACCCCAAAGCAATCGGAGTTGGGCAATACCAACACGACGTCGACCAA
TTTCACCTCGCCAAAGCCCTGGATGCACGTGTAGAAGACTGCGTCAATGCCGTTGGAGTCTATGTCAACACAGCATCCGC
AGCATTGCTATCGCGCGTATCCGGCCTATCTGCGAGCGTCGCCGAAAACATCACTCGCTATCGCGACGAACACGGATCAT
TCAAACAACGCCAAGACCTGCTGAAAGTACCCAGACTCGGCGCAAAGACCTTTGAACAATGCGCCGGATTCCTTCGTATT
GCTGACGGCAACCAACCTCTGGACGCATCTGCAGTACATCCAGAAGCCTACCCAGTCGTCGAACGCATTGTGCAAACCAC
AGGCAAACCAATCAAAGCATTGATTGGCGATAGCCACACCTTACGCATGCTCAAACCAGAACAATTCACTGACACGAACT
TCGGAATACCAACCATCCGCGACATCATCAAAGAACTAGAAAAACCAGGCCGCGACCCACGTCCAGAATTCAAAGCTGTG
CGATTTACAGAAGGCGTAGAAAACATCAAAGACCTCAAACCAGGCATGATCCTTGAAGGAGTCGTTAGCAACGTCGCCGC
ATTTGGTGCCTTCGTCGATATTGGAGTACACCAAGACGGATTAATTCACATATCAGCCCTAGCGGACCGCTTCGTCAAAG
ACCCACGTGACATTGTCAAAGCGGGCGACATTGTCAAAGTCAAAGTTTTGGAGATTGATGTACCGCGCAAACGTATCGCA
CTGACCTGCCGCCTCCATGAAGAAACACCACCAGAAACCCCAGCAGCGAATAGAACTGGGAATGAACGCGGCAGACCCAA
CCCCGTTGCAAAAAAACTCAAAGCCACACCAACCGAAAACGCACTCGCACAAGCCTTCGCACGTGCACGACTCAAATGA

Protein sequence :
MQNSLLTQHIAQIIATEISSQPTQARAAIALLDEGASVPFIARYRKEATGGLDDTQLRTLETRLTYLRELEERRSAILAS
ITEQGKLNDLIHAEILAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADSLLTDPTLIPETVAANFVDPEKGITDIK
TALEGARAILIERWGEDAALIGELRQWLTNNGVIHARLIDNKEDTGAKYRDYFNHTEVLSKIPSHRLLALFRARSEEILH
LDLDPGNDADAGHQYCESMVMQAACVADQGRPADTWLMTACRLTWRAKLHMHLMLDLFNQAREKAEAEAITVFSNNLKDL
LLAAPAGPRIVLGIDPGIRTGCKIAIVDTTGKLIATETIYPHEPRREWDKSLHTLKTLCTQHHVTLIAIGNGTASRETDK
LVSDLIKAHPALKLQKIVVSESGASVYSASESAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVDQ
FHLAKALDARVEDCVNAVGVYVNTASAALLSRVSGLSASVAENITRYRDEHGSFKQRQDLLKVPRLGAKTFEQCAGFLRI
ADGNQPLDASAVHPEAYPVVERIVQTTGKPIKALIGDSHTLRMLKPEQFTDTNFGIPTIRDIIKELEKPGRDPRPEFKAV
RFTEGVENIKDLKPGMILEGVVSNVAAFGAFVDIGVHQDGLIHISALADRFVKDPRDIVKAGDIVKVKVLEIDVPRKRIA
LTCRLHEETPPETPAANRTGNERGRPNPVAKKLKATPTENALAQAFARARLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 58