Gene Information

Name : XfasM23_1226 (XfasM23_1226)
Accession : YP_001829928.1
Strain : Xylella fastidiosa M23
Genome accession: NC_010577
Putative virulence/resistance : Virulence
Product : LytTR family two component transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 1360241 - 1360999 bp
Length : 759 bp
Strand : -
Note : PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: xcb:XC_0648 two-component system regulatory protein

DNA sequence :
TTGCTGCGTATATTGATTGCCGATGATGAGCCGCTTGCGCGTGAGCGGCTGCGTGTGTTGCTGCAAGCACAAATGCAACA
TTTAGAGGTTGTGGCTGAGGCTGAAAATGGCGAGCAGGTATTACATGATTGTCAGCGTCTGAATCCTGATTTGGTCCTGA
TGGACATTGCTATGCCTGGCATTGATGGTTTGGAAACAGCACGTTATTTACGTTATTTACCTGCTTGTCCAGCGGTTGTG
TTTTGCACTGCTTATGGTGATCACGCATTGTCGGCATTTGATGTGGAGGCGATTGATTACCTGATGAAGCCAGTGCGTGC
GGAACGGCTTCATGCGGCATTGAAACGAGTGCAAACCTTCGTGGCTGGACGTTTACGTGAACCCCAGACCTCGTGTGATG
AGACACCACGTACTCATTTGTGCGTGCGTATCCGCGGCGGATTGCGATTGATTCCTTTGGATCAGGTGCGTTATCTACAA
GCAGATGAGAAGTACGTTGTGATCTGTCACGAGCAGGGGGAGGATTTGATTGAGGAATCGTTGAAATCGTTGGAAAAGGA
GTTTAGTGACAGGTTTGTACGTATACATCGCAATTGTTTGATTGCGCGTGCCGAACTGACCGAGTTGCGTCGTTGTAGCG
ATGGACAGGTACAGGCAGTGCTTCGCAATGTTGTTACACCGTTAGCCGTGAGTCGGCGTTGTGTCCCTTTGCTGTGTGAT
CAGTTGCGTCTGTCGGCTGTTTTGACAGGTCGCTGGTAA

Protein sequence :
MLRILIADDEPLARERLRVLLQAQMQHLEVVAEAENGEQVLHDCQRLNPDLVLMDIAMPGIDGLETARYLRYLPACPAVV
FCTAYGDHALSAFDVEAIDYLMKPVRAERLHAALKRVQTFVAGRLREPQTSCDETPRTHLCVRIRGGLRLIPLDQVRYLQ
ADEKYVVICHEQGEDLIEESLKSLEKEFSDRFVRIHRNCLIARAELTELRRCSDGQVQAVLRNVVTPLAVSRRCVPLLCD
QLRLSAVLTGRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-34 42
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XfasM23_1226 YP_001829928.1 LytTR family two component transcriptional regulator VFG0119 Protein 8e-40 48