Gene Information

Name : SGR_6977 (SGR_6977)
Accession : YP_001828489.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Unknown
Product : IS element ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 8373565 - 8374338 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence :
TTGAGCGAGCTGGTCTCCACCCGCATCCGCAACACGGCCGGCAAGCTTGGCCTGCCGCACCTGGCCGAGGCCCTGACGCA
ATACGCCCAGCGGGCCGACGAGGCCAAGATGGGCTACCTCGACTTCATCGACCTGGTCCTCTCCGAAGAACTCGCCGTCC
GTGAAGGCCGCCGCTTCCGCACCGGTCTGCGGATCTCGAAGCTGCCGCACCACAAGACGCTGGACGACTACGACTTCTCA
TTCCAGCCCGAACTTGACCCGCGCAAGGCCAAGGACCTCGCCACGTTGTCGTTCGTCGAGGCCAAAGCCAACGCCGCCCT
GCTCGGGCCGCCAGGAGTGGGCAAGACGCACATCGCCGTCGCTCTCGCGGTCGCCGCCTGCCGGGCCGGATACTCGATCT
ACTTCACCAGCCTCGACGACATGGTCCGCAACCTCAAGACCGCCGAGGCCGCAGGGCGGCTGACCAGCAAGCTCGGCAGC
TACCTCCGGCCAGCGGTTCTCGTGGTCGATGAGGTAGGCTACCAGCCCCTCGAACGAGCTGAGGCCAACCTGGTCTTCCA
GGTCATCTCAAAGCGCTACGAAAAGGGCTCGATCATCCTGACCTTGAACAAGACCTTCAGTGAATGGGGACAGGTGTTCG
GTGACGAGGTCCTGGCCACCGCCATCCTCGACCGCCTCCTGCACCACTGCGACGTGATCTCTATCAACGGCCCCAGCTAC
CGGCTCAAGAACCGACTTGCCGCCATCGAACGCGACCGGGACGACGCCGCCTGA

Protein sequence :
MSELVSTRIRNTAGKLGLPHLAEALTQYAQRADEAKMGYLDFIDLVLSEELAVREGRRFRTGLRISKLPHHKTLDDYDFS
FQPELDPRKAKDLATLSFVEAKANAALLGPPGVGKTHIAVALAVAACRAGYSIYFTSLDDMVRNLKTAEAAGRLTSKLGS
YLRPAVLVVDEVGYQPLERAEANLVFQVISKRYEKGSIILTLNKTFSEWGQVFGDEVLATAILDRLLHHCDVISINGPSY
RLKNRLAAIERDRDDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-42 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-42 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-42 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-42 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-42 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-42 42
unnamed CAA21402.1 - Not tested HPI Protein 3e-42 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-42 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-42 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-42 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-42 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6977 YP_001828489.1 IS element ATP-binding protein VFG1606 Protein 1e-42 42
SGR_6977 YP_001828489.1 IS element ATP-binding protein VFG1515 Protein 1e-42 42
SGR_6977 YP_001828489.1 IS element ATP-binding protein VFG1663 Protein 1e-42 42
SGR_6977 YP_001828489.1 IS element ATP-binding protein VFG1627 Protein 1e-42 42