Gene Information

Name : SGR_6742 (SGR_6742)
Accession : YP_001828254.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 8064278 - 8065069 bp
Length : 792 bp
Strand : +
Note : -

DNA sequence : 
GTGCAAATCCGTGTCGAACAGCTCAGCGCTGGATACACCGGTCATACCGCCGTGGACCAGGTCGACCTGACGGTCCCCTC
CGGGCAGGTCGTGGCGGTCGTCGGCCCCAACGGGTGCGGCAAATCGACTCTCCTGCGTTGCATGGCCCGCCTCCACCAGC
CCCGCTCCGGCCGGGTGTTCGTCGGCGACGCCGACGTCTGGCAGCTGCGGCAGCGCGACGCCGCCCACCGCATCGCCCTG
CTGCCCCAGGCCCCGCAGGCGCCGGAGGCGGTCACCGTCGCCGGACTCGTACGGTACGGACGCCACCCCCACCAGGGGCT
GTTCCGCCAGTGGTCGCGGGAGGACGAGCGCGCGGTCACCCGTGCCCTGGAGGCCACCGGCACGGCCGCCCTGGCCGGCC
GCCGGCTCGACCAGCTCTCCGGCGGCCAGCGCCAGCGCTGCTGGCTCGCCATGTCCCTCGCCCAGGAGACCCCCGTCGTC
CTCCTCGACGAGCCCACCAGCGCCCTCGACATCGGCCACGCCGTGGAGGTCCTGGACCTGGTGCGCGAAGTCGCCGCGCA
GGGCCGCACCATCGTGATGGTGCTCCACGACCTCGCCGCCGCCGCACGGTACGCCGACCTCCTGGTCGCCATGCGCGACG
GACGGATCGTCGCCTCGGGTCCGCCCCGCGAGACCGTGGACACCGCACTGGTCCGGGAGCTCTACGGCGTCGAGGCGGAG
ATCCTCACCGCGACCTCCGACGGGGCCCCCGTCGTCGTACCGACCGTCCGCGTGCCGGTCGCCGGCGCCTGA

Protein sequence : 
MQIRVEQLSAGYTGHTAVDQVDLTVPSGQVVAVVGPNGCGKSTLLRCMARLHQPRSGRVFVGDADVWQLRQRDAAHRIAL
LPQAPQAPEAVTVAGLVRYGRHPHQGLFRQWSREDERAVTRALEATGTAALAGRRLDQLSGGQRQRCWLAMSLAQETPVV
LLDEPTSALDIGHAVEVLDLVREVAAQGRTIVMVLHDLAAAARYADLLVAMRDGRIVASGPPRETVDTALVRELYGVEAE
ILTATSDGAPVVVPTVRVPVAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-40 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-36 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-37 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-37 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-37 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-37 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-33 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-36 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-36 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-36 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6742 YP_001828254.1 iron-siderophore uptake ABC transporter ATP-binding protein BAC0164 Protein 3e-40 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6742 YP_001828254.1 iron-siderophore uptake ABC transporter ATP-binding protein VFG1042 Protein 3e-40 50
SGR_6742 YP_001828254.1 iron-siderophore uptake ABC transporter ATP-binding protein VFG0925 Protein 1e-38 47