Gene Information

Name : SGR_6713 (SGR_6713)
Accession : YP_001828225.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 8011976 - 8012836 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence : 
GTGGCAGCTCAGTTCACCGCCCGGACCGCAGCGGGCGTCGAGGACGTCCCCCGGCTGGCGGCCAGGGGCATCACCGTCGG
GTACGGGGACCGCACGGTCATCGACCAGCTCGACGTCACCGTTCCCCCCGGGGTGATCACCACGATCATCGGCCCCAACG
GGTGCGGGAAGTCCACCCTGCTCCGGACCCTGAGCCGGCTGCTCAAACCGGCCGGCGGCTCCGTCGTGCTGGACGGCGAG
GACATCGGCAGGCTCCGTACCAGGGACGTGGCGAAGAAGCTCGGACTGCTGCCGCAGGCGCCGGTCGCGCCGGAGGGGCT
GACCGTCGCCGACCTGGTCGCCCGGGGGCGCCACCCGCACCAGAGCTGGCTGCGGCAGTGGTCGTCGGACGACGCGGACG
TGGTGCGGCGCGCGCTGGCCATGACCGGGGTGGCGGAGCTGGCCGACCGGCCCGTCGACTCGCTGTCCGGCGGCCAGCGC
CAGCGCGTGTGGATATCGATGACCCTCGCTCAGGGCACCGACCTGCTGCTGCTCGACGAGCCGACCACCTACCTGGACCT
GGCCCACGCCATCGACGTACTCGACCTGGTCGACGACCTGCACGAGTCCGGGCGCACCGTGGTCATGGTCCTGCACGACC
TCAACCTGGCCACGCGCTACAGCGACAACCTCGTCGTCATGCGGGCGGGAGCCGTCCTGGCGCAGGGACACCCCCGGGAC
GTGATCACCGCCGAACTGCTCCACGAGGCGTTCGGGCTGCGGGCCGAGGTGATCGAGGATCCGGTGGGGGACCGCCCGCT
CATCGTGCCGATCGGCCGCACACATGTGCGGCACGATCCGTGCAACGGGCCTGCCCGGTAG

Protein sequence : 
MAAQFTARTAAGVEDVPRLAARGITVGYGDRTVIDQLDVTVPPGVITTIIGPNGCGKSTLLRTLSRLLKPAGGSVVLDGE
DIGRLRTRDVAKKLGLLPQAPVAPEGLTVADLVARGRHPHQSWLRQWSSDDADVVRRALAMTGVAELADRPVDSLSGGQR
QRVWISMTLAQGTDLLLLDEPTTYLDLAHAIDVLDLVDDLHESGRTVVMVLHDLNLATRYSDNLVVMRAGAVLAQGHPRD
VITAELLHEAFGLRAEVIEDPVGDRPLIVPIGRTHVRHDPCNGPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-67 61
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-52 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-59 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-59 46
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-51 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-50 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-56 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-56 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-56 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-56 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 9e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6713 YP_001828225.1 ABC-type Fe3+-siderophore transporter ATP-binding protein BAC0164 Protein 4e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6713 YP_001828225.1 ABC-type Fe3+-siderophore transporter ATP-binding protein VFG0925 Protein 2e-62 54
SGR_6713 YP_001828225.1 ABC-type Fe3+-siderophore transporter ATP-binding protein VFG1042 Protein 4e-52 49