Gene Information

Name : SGR_6581 (SGR_6581)
Accession : YP_001828093.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 7858798 - 7859601 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence : 
GTGACCCACCCCATCGAAGCCCGTTCCATCACCGCCGGATACGGCAAGGACTCCGTCATCGACGGCCTCTCCGTGGCCGT
CCCGAGGGGCCGGATCACCGCGCTGGTCGGCCCCAACGCCTGCGGCAAGTCCACGCTGCTGAAGTCGCTGGCCCGGCTGC
TGCCCGTCGCGTCGGGGTCGGTGCTGCTGGAGGGCTCCGACATCCACGCCCTGCCGACCCGCGAGGTGGCCCGGAAGCTC
GGCATCCTGCCGCAGTCCCCGATCGCACCGGAGTCCATCACGGTCGGCGACCTGGTCTGGCGGGGCCGCCATCCGCACCG
CAGGTTCGGACAGCGGCGCACCGCGGCGGACGACGCGCTGATCACCGACGCGCTGCTGGCGACCGGAACGGCCGAGCTGA
TCGACCGCCCGGTGGACGAGCTCTCCGGCGGGCAGCGCCAACGCGTCTGGATCGCGCTCGCGCTCGCCCAGGACACCCCG
GTGCTCCTGCTGGACGAGCCGACCACCTATCTCGACATCGCCCACCAATTCGAGGTCATGGACCTGCTGGGCGATCTCAA
CGAACAGACCGGCAAGACGATCGTGCTGGTCTCCCACGACCTCAACCAGGCCGCCCTGTACGCCTCGTCGATCGTCGCCA
TGCGCGCCGGCCGGATCGTGCACCAGGGCGCACCCGAGCAGGTGCTCACCGAGGAAACCGTCGCCGACGTGTTCGGTCTG
AACTGCGTCGTCGTGCCCCATCCCCGTACCGCGAAGCCCCAGATCTTCCCCCTGGGACGTCGCACCCTCACGCAGGAGAA
GTGA

Protein sequence : 
MTHPIEARSITAGYGKDSVIDGLSVAVPRGRITALVGPNACGKSTLLKSLARLLPVASGSVLLEGSDIHALPTREVARKL
GILPQSPIAPESITVGDLVWRGRHPHRRFGQRRTAADDALITDALLATGTAELIDRPVDELSGGQRQRVWIALALAQDTP
VLLLDEPTTYLDIAHQFEVMDLLGDLNEQTGKTIVLVSHDLNQAALYASSIVAMRAGRIVHQGAPEQVLTEETVADVFGL
NCVVVPHPRTAKPQIFPLGRRTLTQEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-48 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-56 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-51 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-51 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-51 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-51 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-48 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-53 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-53 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-46 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-46 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-46 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-46 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 8e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6581 YP_001828093.1 ABC transporter ATP-binding protein BAC0164 Protein 4e-48 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6581 YP_001828093.1 ABC transporter ATP-binding protein VFG0925 Protein 4e-58 49
SGR_6581 YP_001828093.1 ABC transporter ATP-binding protein VFG1042 Protein 4e-48 48