Gene Information

Name : SGR_6561 (SGR_6561)
Accession : YP_001828073.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 7831464 - 7832111 bp
Length : 648 bp
Strand : +
Note : -

DNA sequence : 
TTGATAGCGGAGGACGAGGAAAGAATCGCCGCCTTCGTCGAAAAAGGCCTGCGTCGTAGCGGGTACGTCACCCGGGTCGT
CGCCGATGGTCTCTCCGCCTACGAGCACGCCCGCGGGCGCGACTTCGACCTCCTGATCCTCGATCTCGGCCTGCCCGGCG
ACGACGGGCTGACGGTGCTGCGCAAACTGCGCAAGGCGCGCATCTCCCTGCCCGTCGTCATCCTCACCGCGCGCGACAGC
GTGAGCGACATCGTGGCCGGGCTGGAGAGCGGCGCCGACGACTACATGGTCAAACCCTTCGCCTTCGACGAGTTACTGGC
CCGCGTACGCCTGCGCCTGCGCCGTGAGGAGCCCGCGGAGAACTTCCTGCTGCGGGTGGGCGATCTGATCCTCGACCTGC
GCACCCGACGGGCCCAGGTGGGCGACCGGGTCTCCGACCTGTCCGCCCGCGAGTTCGCCCTCGCCGAGATCCTCATGCGC
AACCCCGACCGGGTGCTGTCACGGGAGCAACTGCTGAGCCAGGTATGGGGGTTCGACTACGACCCCGGTTCGAACATCGT
CGACGTCTACATCCGCTATCTGCGGCGCAAGATCGGCGCCGACCGGGTCCAGACCGTGCGGGGCGTCGGCTACCGCCTCC
GGGCCTGA

Protein sequence : 
MIAEDEERIAAFVEKGLRRSGYVTRVVADGLSAYEHARGRDFDLLILDLGLPGDDGLTVLRKLRKARISLPVVILTARDS
VSDIVAGLESGADDYMVKPFAFDELLARVRLRLRREEPAENFLLRVGDLILDLRTRRAQVGDRVSDLSAREFALAEILMR
NPDRVLSREQLLSQVWGFDYDPGSNIVDVYIRYLRRKIGADRVQTVRGVGYRLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-17 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6561 YP_001828073.1 two-component system response regulator BAC0197 Protein 7e-25 48
SGR_6561 YP_001828073.1 two-component system response regulator BAC0125 Protein 2e-22 46
SGR_6561 YP_001828073.1 two-component system response regulator BAC0083 Protein 4e-26 45
SGR_6561 YP_001828073.1 two-component system response regulator HE999704.1.gene1528. Protein 7e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6561 YP_001828073.1 two-component system response regulator VFG1390 Protein 2e-27 45
SGR_6561 YP_001828073.1 two-component system response regulator VFG1389 Protein 1e-25 45
SGR_6561 YP_001828073.1 two-component system response regulator VFG0596 Protein 4e-18 43