Gene Information

Name : SGR_6413 (SGR_6413)
Accession : YP_001827925.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : iron ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 7668865 - 7669923 bp
Length : 1059 bp
Strand : +
Note : -

DNA sequence :
ATGGCACAGGCGCTCGCGCCGACGACCGCGCCACCACCGGCCGCGCCGTCGAGGTCGTCACGTCGCAGGACCCGTCGGCT
CCTCGGCCTGGGCGTCGCCCTCGGCACGCTCCTGGTGGCGGTGGTCCTCAGCGTCGCGATCGGCTCGGCGATGCTCCCCC
TCGACGTGGTGTGGCAGGCGCTGACCGCCCCCGACGGCTCCGCCTCGCACGCCACGATCAGCGGCGCCCGCGTGGACCGC
ACGCTGCTCGGCATCGTCGTCGGCGCGTCCCTCGGGGTCGCGGGGGCGCTCATCCAGGCGCTCACCCGCAATCCGCTCGC
CGACCCCGGTGTCCTCGGCGTCAACGCCGGCGCGAGCTTCGCCGTCACCCTGGCCGTCGCCGCCTTCGGCGTCACCCGCA
TCGACCAGTACCTGCCCTTCGCCTTCGCCGGCGCCGTCGTCGGCTCGGCGGTCGTCTACCTCGCCGCGAGCGGCGGACGG
GGCGGACCCACACCGCTGCGCCTCACCCTGGTCGGGGTCGCCTTCTCGGCGGTGCTGCTCGGCATCTCCCAGACCCTCGC
CCTGATCGACACGGACACCTTCGACCGCATGCGGTTCTGGGGAGCCGGCACCATCACCGACCGCCCGACCGGCACCGCCG
CCGACATCGCGCCCTTCGTGCTGGCCGGACTGCTGGCCGCCGCCCTCTGCGCCCGCCCGCTCAACGCGATCGCGCTCGGC
GACGACGCGGGGCGGGCCGTCGGGCTGCGGGTCGGCGCGACCCGGTGCGGTGTGGTGGTCGCGGTGGCCCTGCTGTGCGG
TTCGGCGACGGCCGCCGCGGGCCCGCTGATGTTCGTCGGCCTCATGGTCCCGCACGCCGTGCGCCGGCTCACCGGGCCCG
ACTGGCGCTGGATCCTGGTCTACTCCGCCGTCCTCGCCCCGGCGATCGTGCTGTTCGCCGATGTGCTGGGCCGACTGATC
GTCATTCCGTCCGAACTCCAGGTCGGCGTCATGATGCCGCTCATCGGAGCGCCCGTACTGATCCTGCTGGTGCGCGGAAA
CCGGGTGAGGCAACTGTGA

Protein sequence :
MAQALAPTTAPPPAAPSRSSRRRTRRLLGLGVALGTLLVAVVLSVAIGSAMLPLDVVWQALTAPDGSASHATISGARVDR
TLLGIVVGASLGVAGALIQALTRNPLADPGVLGVNAGASFAVTLAVAAFGVTRIDQYLPFAFAGAVVGSAVVYLAASGGR
GGPTPLRLTLVGVAFSAVLLGISQTLALIDTDTFDRMRFWGAGTITDRPTGTAADIAPFVLAGLLAAALCARPLNAIALG
DDAGRAVGLRVGATRCGVVVAVALLCGSATAAAGPLMFVGLMVPHAVRRLTGPDWRWILVYSAVLAPAIVLFADVLGRLI
VIPSELQVGVMMPLIGAPVLILLVRGNRVRQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-29 44
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-29 44
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-29 44
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-29 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_6413 YP_001827925.1 iron ABC transporter VFG0926 Protein 2e-37 48