Gene Information

Name : SGR_5710 (SGR_5710)
Accession : YP_001827222.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 6693065 - 6693934 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence : 
GTGCTGCTCGGTGGTCCGCCCGTGCCCCGCGCCGTGCCGCTCCACCTCACCGACTCCGGGAGTACGACCATGCAGCGCCT
CACCGCAGAATCGGTGACCCTCGGCTACGACCAGCGGGTCATCACCGAGAACCTCTCGGTGGAGATTCCCGACAACTCCT
TCACCGTGATCGTCGGTCCCAACGCCTGCGGCAAGTCGACCCTGCTGCGTGCCCTCGCCCGGATGCTGAAGCCGAGCCGG
GGGCAGGTGCTGCTGGACGGGGAGGCCATCCACCAGCTGCCGGCGAAGAAGGTCGCCCGGACGCTGGGGCTGCTGCCGCA
GTCCTCCATAGCCCCCGACGGGATCACCGTCGCCGACCTCGTCGCCCGCGGCCGCTACCCCCACCAGGGGCTGCTGCGGC
AGTGGTCGCCGGAGGACGAGCGAGTCGTCGAGGAGTCCATGGAGTCCACCGGCGTCGCCGAGCTGGCCGATCGCTATGTC
GACGAACTCTCCGGTGGTCAGCGCCAGCGGGTCTGGATCGCCATGGCGCTGGCCCAGCAGACGCCGCTGCTGCTGCTCGA
CGAGCCCACGACGTACCTCGACATCCAGCACCAGATCGATGTCCTCGACCTGTGCGCGGAGCTGCACGAGACGCAGGGCC
GCACGCTGGTCGCGGTGCTCCACGACCTGAACCACGCCGCGCGGTACGCCACCCACCTCATCGCGATGCGGGACGGGGCG
ATCGTCGCGGAGGGGCCGCCTTCGGAGGTCGTCGACGCGGAGCTGGTGGAGCGGGTGTTCGGGATGCGGTGCCAGGTGAT
CGACGATCCGGAGACCGGGACGCCGCTGGTCGTGCCCGCGGCCCGCAAGGCTCGGAAGGTCGCCGCCTGA

Protein sequence : 
MLLGGPPVPRAVPLHLTDSGSTTMQRLTAESVTLGYDQRVITENLSVEIPDNSFTVIVGPNACGKSTLLRALARMLKPSR
GQVLLDGEAIHQLPAKKVARTLGLLPQSSIAPDGITVADLVARGRYPHQGLLRQWSPEDERVVEESMESTGVAELADRYV
DELSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVLDLCAELHETQGRTLVAVLHDLNHAARYATHLIAMRDGA
IVAEGPPSEVVDAELVERVFGMRCQVIDDPETGTPLVVPAARKARKVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-64 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-68 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-68 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-68 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-68 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-60 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-60 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-51 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-54 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_5710 YP_001827222.1 iron-siderophore uptake ABC transporter ATP-binding protein BAC0164 Protein 1e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_5710 YP_001827222.1 iron-siderophore uptake ABC transporter ATP-binding protein VFG0925 Protein 7e-79 60
SGR_5710 YP_001827222.1 iron-siderophore uptake ABC transporter ATP-binding protein VFG1042 Protein 1e-51 46