Gene Information

Name : SGR_5516 (SGR_5516)
Accession : YP_001827028.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 6481602 - 6483041 bp
Length : 1440 bp
Strand : +
Note : -

DNA sequence :
ATGCGCCGAGCGAAAATCGTTTGTACCCTGGGACCCGCAACCGACACATACGACCAGATCAAAGCCCTGGTCGAAGCGGG
AATGGACATCGCCCGCTTCAACCTCAGCCACGGCAGCTACGCCGAGCACGAAGCGCGCTACCACCACGTCCGCACAGCAT
CCGAGGAAACCGGCCGCAGCGTCGGCATCCTCGCCGACCTTCAAGGCCCGAAGATCCGCCTCGGACGCTTCCGCGAAGGC
CCCGTACTCCTTGAACGCGGCGACACCTTCACCATCACCGTCGAACCCCTCGAAGGCGAAGGCACCGGCGACATCTGCGG
CACCACCTACGACGGACTCGCCGCCGACGTCACCACCGGCGAACGCATCCTCGTCGACGACGGCCGCGTCACCCTCGAAG
TCACCGGCGTCGAAGGCCCCCGCGTCCACACCACCGTCATCGAAGGCGGCATGGTCTCCGACAACAAGGGCCTCAACCTC
CCCGGCGTCGCCGTCTCCGTCCCCGCACTCTCCGAAAAAGACATCGACGACCTCCGCTGGGCCCTGCGCACCGGCGCCGA
CCTCATCGCCCTCTCCTTCGTCCGCACCGGACGCGACATCGACGACGTCCACCGCATCATGGACGAAGAGGGCCGCCGCC
TCCCCGTCATCGCCAAGGTCGAGAAGCCTCAGGCCGTCGACAACATCGACGACATCGTCGCCGCCTTCGACGGCATCATG
GTCGCCCGCGGCGACCTCGGCGTCGAAATGCCCCTGGAACAAGTCCCCATCGTCCAGAAACGCGCCATCAAGCTCGCCAA
GCGCAACGCCAAACCGGTCATCGTCGCCACCCAGATGCTCGACTCGATGATCGACAACTCCCGCCCCACCCGCGCCGAAG
CCTCCGACGTCGCCAACGCCATCATCGACGGCACCGACGCGGTCATGCTCTCCGGCGAGACCAGCGTCGGGAAGTACCCC
GTCGAGACCGTCCGCACCATGTCCCGCATCGTCGAGGCCGCCGAGGAAGACCTCCTCTCCAAGGGCCTCCCGCCCCTCAC
CGAACGCAACAAGCCCCGCACCCAGGGCGGCGCCGTCGCGAGGGCCGCCGCAGAGATGGGCGACTTCCTCGGCGCCAAGT
TCCTCGTCGCCTTCACCCAGAGCGGCGACACCGTCAAGCGCCTCTCCCGCTACCGCTCACCCATCCCGCTCCTCGCCTTC
ACCCCCGACGAAGCCACCCGCGCCCAGCTCAACCTGACGTGGGGCGTCGAGACCTTCCTGGGCCCGAAGGTCGACTCCAC
GGACGCGATGGTCGCCCAGGTCGACGAGGAGCTGCTGCGGATCGGGCGCTGCGCGAAGGGCGACGTGGTCGTCATCACCG
CCGGCTCCCCGCCCGGCGTCGCGGGCTCGACGAACCTGGTCCGCGTCCACCACATCGGCGAGGACGACAGCCCGAAGTAG

Protein sequence :
MRRAKIVCTLGPATDTYDQIKALVEAGMDIARFNLSHGSYAEHEARYHHVRTASEETGRSVGILADLQGPKIRLGRFREG
PVLLERGDTFTITVEPLEGEGTGDICGTTYDGLAADVTTGERILVDDGRVTLEVTGVEGPRVHTTVIEGGMVSDNKGLNL
PGVAVSVPALSEKDIDDLRWALRTGADLIALSFVRTGRDIDDVHRIMDEEGRRLPVIAKVEKPQAVDNIDDIVAAFDGIM
VARGDLGVEMPLEQVPIVQKRAIKLAKRNAKPVIVATQMLDSMIDNSRPTRAEASDVANAIIDGTDAVMLSGETSVGKYP
VETVRTMSRIVEAAEEDLLSKGLPPLTERNKPRTQGGAVARAAAEMGDFLGAKFLVAFTQSGDTVKRLSRYRSPIPLLAF
TPDEATRAQLNLTWGVETFLGPKVDSTDAMVAQVDEELLRIGRCAKGDVVVITAGSPPGVAGSTNLVRVHHIGEDDSPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-81 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-81 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-81 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-81 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_5516 YP_001827028.1 pyruvate kinase VFG0479 Protein 2e-81 43