Gene Information

Name : SGR_539 (SGR_539)
Accession : YP_001822051.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 623910 - 624815 bp
Length : 906 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGGAAGGCCTGACCGGACCAGTGGAGTCGAGCCCGGTGGAGGAGGCCGGAGCGGAAGCGGAACCCGGCGGGGCGCC
CGGTCCCGAGGTCGTACGGGCGGAGGGGCTGACCTTTGGCTACCCGGGCCGGCCGGTCCTGCGCGGGGTGGACCTGAGCG
TCCGGGCCGGGGAGTTGGTCGCCCTGATCGGACTGAACGGCTGCGGCAAGAGCACCCTGCTCAAGCTCGCCGCCGGACTG
CTCACCCCGAGCGGCGGGCGCGTTCTGCTGGAAGGCGACGACGTGGCCCGGCTGCCCCGCCGTGCCGCCGCCCGGCGCGT
CGCCCTGCTCCACCAGTCGGCCCCCGCCGTTCCGGGACTGACGGTGCGGCAACTCGTGCGACAGGGGCGCTATGCCGCCC
GGGGGCCGCTCGGGATGTTGCGGGAGGGCGACGACGAGGTGACGTCGCGGGCGCTCGCGGACGTCGGCGTCACCGCCTGG
GCCGACCGGCCCGTGGACGCCCTGTCCGGGGGTGAACGCCAGCGGGTCCGGCTGGCCATGGCGCTGGCCCAGGACGCCCG
CCTGCTCTTTCTCGACGAGCCGACCACCTATCTCGATCTGCGGCACCAACTGGAGGTGCTCCGGACGGTCGTACGGCTGC
GCGCGGAACGCCGGCTGACGGTGGTGATGGTGCTGCACGACCTCAACCACGCCGCGCGGTTCGCCGATCGGATCGTCGCG
CTGCGCGAGGGCCGCGTGGCCGCCGACGGGCCTCCGGCCGAGGTGGTCACCCGGCGTCTGCTGGCCGAAGTCCTCGGTGT
GGAGGGCCGGGTGGGGATCGACAGTGAGGGCGGCTGGCCCGTCTGTTACCCAGATCACCCTCTCGAACCGCTCCAGCTAT
TGCGGAATGAAAATCATATTCATTAG

Protein sequence : 
MPEGLTGPVESSPVEEAGAEAEPGGAPGPEVVRAEGLTFGYPGRPVLRGVDLSVRAGELVALIGLNGCGKSTLLKLAAGL
LTPSGGRVLLEGDDVARLPRRAAARRVALLHQSAPAVPGLTVRQLVRQGRYAARGPLGMLREGDDEVTSRALADVGVTAW
ADRPVDALSGGERQRVRLAMALAQDARLLFLDEPTTYLDLRHQLEVLRTVVRLRAERRLTVVMVLHDLNHAARFADRIVA
LREGRVAADGPPAEVVTRRLLAEVLGVEGRVGIDSEGGWPVCYPDHPLEPLQLLRNENHIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-35 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-34 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-30 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_539 YP_001822051.1 ABC-type Fe3+-siderophore transporter ATP-binding protein BAC0164 Protein 1e-35 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_539 YP_001822051.1 ABC-type Fe3+-siderophore transporter ATP-binding protein VFG1042 Protein 9e-36 44
SGR_539 YP_001822051.1 ABC-type Fe3+-siderophore transporter ATP-binding protein VFG0925 Protein 4e-39 42