Gene Information

Name : SGR_5117 (SGR_5117)
Accession : YP_001826629.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6030257 - 6030916 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCGCATCCTGATCGCCGAGGACGAGGAGCGCATCGCCTCGTTCGTCCAGAAGGGGCTGCGCGCCAACGGCTTCAC
CACGGTCGTCGCCGAGGACGGCGACCTGGCGCTGGGCCACGCCCTGACCGGCGGGTTCGACCTGATGGTCCTCGACATCG
GGCTGCCCGGCCGGGACGGCTTCACCGTGCTGCGGGAGCTGCGCGAGGCCCGCGTCACACTGCCGGTGATCGTGCTCACC
GCCCGCGACTCGGTGCGGGACACGGTGGCCGGGCTGGAGGGCGGGGCCGACGACTGGATGACGAAGCCGTTCCGCTTCGA
GGAGCTGCTCGCCCGGGTACGGCTGCGGCAGCGCACCGCCGCCCGCGCGCCCGAGGTCACCATGTTGCGCAGCGGCAGCC
TCGCCCTGGACCTGCGGACGCGCCGGGCCCGCGCGGACGACCGGACCGTGGACCTGACGGCGCGCGAGTTCGTGCTCCTG
GAGATGTTCCTGCGCCACCCCGGCCAGGTGCTGTCGCGCGAGCAGATCCTCTCCCATGTGTGGGGGTACGACTTCGATCC
CGGTTCCAACATCGTGGACGTCTACGTCCGCGCGCTGCGCCGGAAGCTGGGCGCGGAGCGGCTGGAGACGATCCGGGGCA
TGGGCTACCGCCTGCCCTGA

Protein sequence : 
MNRILIAEDEERIASFVQKGLRANGFTTVVAEDGDLALGHALTGGFDLMVLDIGLPGRDGFTVLRELREARVTLPVIVLT
ARDSVRDTVAGLEGGADDWMTKPFRFEELLARVRLRQRTAARAPEVTMLRSGSLALDLRTRRARADDRTVDLTAREFVLL
EMFLRHPGQVLSREQILSHVWGYDFDPGSNIVDVYVRALRRKLGAERLETIRGMGYRLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-30 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_5117 YP_001826629.1 two-component system response regulator BAC0197 Protein 6e-31 48
SGR_5117 YP_001826629.1 two-component system response regulator BAC0638 Protein 2e-27 46
SGR_5117 YP_001826629.1 two-component system response regulator BAC0125 Protein 1e-31 45
SGR_5117 YP_001826629.1 two-component system response regulator BAC0083 Protein 4e-33 45
SGR_5117 YP_001826629.1 two-component system response regulator BAC0308 Protein 3e-31 43
SGR_5117 YP_001826629.1 two-component system response regulator HE999704.1.gene1528. Protein 8e-25 43
SGR_5117 YP_001826629.1 two-component system response regulator BAC0111 Protein 4e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_5117 YP_001826629.1 two-component system response regulator VFG1389 Protein 1e-28 47
SGR_5117 YP_001826629.1 two-component system response regulator VFG1390 Protein 5e-31 45
SGR_5117 YP_001826629.1 two-component system response regulator VFG0596 Protein 1e-30 44