Gene Information

Name : SGR_4569 (SGR_4569)
Accession : YP_001826081.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5368932 - 5369834 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence : 
ATGACCACCCCCTTCGGAACCCCGCAGAAGGACCTCCCCGCCATGACCAAGCCCGACGCCCGCCTGCGGGCCGACGACAT
CACCATCGGCTACGACCGCCGCACCATCTCGCGGAACCTCTCCGTGGAGATACCGGACGGCTCCTTCACCGTGATCGTCG
GCCCGAACGCCTGCGGCAAGTCGACGCTCCTGCGCGGCCTGTCGAAGCTGCTGCGCCCCAGCACCGGTCAGGTGGTCCTG
GACGGCCGGGCGATCACCTCGTACAAGTCCAAGGAGGTGGCCCGCCGGCTGGGGCTGCTGCCGCAGACCTCGCTCGCCCC
CGACGGCATCACCGTCGCCGACCTGATCGCGCGTGGCCGCCACCCGCACCAGAAGCTGATCAAGCAGTGGTCGAGGGAGG
ACGAGGAGGCGGTGCTCCGGGCGATGGAGGAGACCAGCGTCACCGCACTCTCGGCCCGGCCGGTCGACGAGCTGTCCGGC
GGGCAGCGCCAGCGGGTCTGGGTGGCGATGGTGCTGGCCCAGGAGACCCCGCTGCTGCTGCTCGACGAACCGACGACCTT
CCTCGACATCGCCCACCAGATCGAGCTGCTGGAGCTGTTCCAGCGGCTCAACCGGGAGGGCCGCACGCTCGTCGCCGTCC
TGCACGACCTGAACCAGGCCGCCCGCTACGGCACCCACGTCATCGCGATGAAGGACGGGGCCGTCGTCGCGGAGGGGCCG
CCCGCCGGCCTGATCACCGAGGAGCTGGTCGAGGACGTCTTCGCACTGCCCTGCCGGATCATCGAGGACCCCGTCTCGCA
CAGCCCCCTCGTCATCCCGCTCGGCTCGCTCGGCTCGCCGCCGCCCCCGCACGCGGCGCCGTCCCCTTCCTCGACCCCGT
CCACGTCCCCGCTCCCGCGATGA

Protein sequence : 
MTTPFGTPQKDLPAMTKPDARLRADDITIGYDRRTISRNLSVEIPDGSFTVIVGPNACGKSTLLRGLSKLLRPSTGQVVL
DGRAITSYKSKEVARRLGLLPQTSLAPDGITVADLIARGRHPHQKLIKQWSREDEEAVLRAMEETSVTALSARPVDELSG
GQRQRVWVAMVLAQETPLLLLDEPTTFLDIAHQIELLELFQRLNREGRTLVAVLHDLNQAARYGTHVIAMKDGAVVAEGP
PAGLITEELVEDVFALPCRIIEDPVSHSPLVIPLGSLGSPPPPHAAPSPSSTPSTSPLPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-56 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-57 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-57 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-57 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-57 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-53 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-53 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-45 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-45 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_4569 YP_001826081.1 iron-siderophore uptake system ATP-binding protein BAC0164 Protein 6e-46 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_4569 YP_001826081.1 iron-siderophore uptake system ATP-binding protein VFG0925 Protein 7e-70 60
SGR_4569 YP_001826081.1 iron-siderophore uptake system ATP-binding protein VFG1042 Protein 6e-46 47