Gene Information

Name : SGR_4474 (SGR_4474)
Accession : YP_001825986.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5235066 - 5235743 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGACCCGTGTACTGCTCGCCGAGGACGACGCATCCATCTCGGAGCCACTGGCCCGCGCACTGCGTCGGGAGGGTTACGA
GGTCGAGGTCCGCCAGGACGGTCCGACCGCGCTCGACGCCGGACTCCAGGGCGGCATCGACCTGGTCGTCCTCGACCTGG
GGCTGCCCGGGATGGACGGTCTCGAAGTCGCCCGCAGGCTCCGGGCCGGCGGCCACACCATCCCGATCCTGGTGCTGACG
GCCCGCGCCGACGAGGTCGACACGGTCGTCGGCCTGGACGCGGGCGCCGACGACTACGTCACCAAGCCGTTCCGGCTCGC
CGAGCTCCTCGCCCGGGTCCGCGCCCTGCTGCGCCGCGGGGCCTCCGAGCCCGTCGCGCAGCCCGCCACCCACGGGGTCA
GGATCGACGTCGAGTCGCACCGCGCCTGGATGGGCGAGGAGGAACTCCAGCTCACCGCGAAGGAGTTCGACCTCCTGCGG
GTCCTGGTCCGGGACGCCGGCCGGGTCGTCACCCGCGACCAGCTGATGCGTGAGGTCTGGGACACCACCTGGTGGTCGTC
CACCAAGACCCTCGACATGCACATCTCCTGGCTCCGCAAGAAGCTCGGCGACGACGCCGCCAATCCGCGCTACATCGCCA
CCGTCCGGGGCGTCGGCTTCCGGTTCGAGAAGAGCTGA

Protein sequence : 
MTRVLLAEDDASISEPLARALRREGYEVEVRQDGPTALDAGLQGGIDLVVLDLGLPGMDGLEVARRLRAGGHTIPILVLT
ARADEVDTVVGLDAGADDYVTKPFRLAELLARVRALLRRGASEPVAQPATHGVRIDVESHRAWMGEEELQLTAKEFDLLR
VLVRDAGRVVTRDQLMREVWDTTWWSSTKTLDMHISWLRKKLGDDAANPRYIATVRGVGFRFEKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_4474 YP_001825986.1 two-component system response regulator AE000516.2.gene3505. Protein 9e-30 47
SGR_4474 YP_001825986.1 two-component system response regulator BAC0083 Protein 8e-21 43
SGR_4474 YP_001825986.1 two-component system response regulator NC_012469.1.7685629. Protein 9e-27 41
SGR_4474 YP_001825986.1 two-component system response regulator NC_003923.1003749.p0 Protein 1e-28 41
SGR_4474 YP_001825986.1 two-component system response regulator BAC0197 Protein 6e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_4474 YP_001825986.1 two-component system response regulator VFG1390 Protein 5e-27 44
SGR_4474 YP_001825986.1 two-component system response regulator VFG1389 Protein 3e-23 43
SGR_4474 YP_001825986.1 two-component system response regulator VFG0473 Protein 4e-18 41
SGR_4474 YP_001825986.1 two-component system response regulator VFG0596 Protein 9e-16 41