Gene Information

Name : SGR_3233 (SGR_3233)
Accession : YP_001824745.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3756466 - 3757215 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence :
GTGACCCGTACCCACGGCCGCGAAGGCCGCGACGGCGGCACGGTGAAGGCGCTCGACGACGTCAGCCTGACCATCCGCCG
CGGCACGTTCACCGCCGTCATGGGGCCCTCCGGTTCCGGCAAGTCGACGCTCCTGCACTGCGCCGCAGGCCTGGACCGGC
CGACCGGCGGCCGGGTGCTGCTCGGCGACACCGATCTGACCGGGCTGAGCGAGGCCCGGCTGACCCGGCTGCGCCGGGAG
CGGATCGGCTTCGTCTTCCAGGCGTTCAACCTGCTGCCCTCCCTGACCGCCGCGCAGAACGTGGCCCTGCCCCTGCGGCT
GGCCGGCCGGCGGCCACGCAGGGCCGAGGTGCTCCACGCCCTGGACCGGGTCGGCCTGCGCGGCCGGGCGGGCCACCGGC
CCGGCGAACTCTCCGGCGGCCAGCAACAGCGGGTGGCGATCGCCCGCGCCCTGATGACCGGCCCCGAGGTGCTGTTCGGC
GACGAACCGACCGGGGCCCTGGACTCCACCGCCGGCCGCGTGGTGCTCGGCCTGCTGCGTGAGATGACCGACGAGGGGCG
CACCGTGATCATGGTGACCCACGACCCGGTCGCCGCCTCCTTCGCCGACCGGGTCGTCTTCCTCGCCGACGGCCGGATCC
GGGACGAGTTGGAGGGGCCCACGGCGGAGCGGGTCGCCGCCCGCATGGCGGCCGACGCCGCCCCGGCCGCCCCGACGCGC
TCCACCGGCTCGGCGGTGGTCCCGTGCTGA

Protein sequence :
MTRTHGREGRDGGTVKALDDVSLTIRRGTFTAVMGPSGSGKSTLLHCAAGLDRPTGGRVLLGDTDLTGLSEARLTRLRRE
RIGFVFQAFNLLPSLTAAQNVALPLRLAGRRPRRAEVLHALDRVGLRGRAGHRPGELSGGQQQRVAIARALMTGPEVLFG
DEPTGALDSTAGRVVLGLLREMTDEGRTVIMVTHDPVAASFADRVVFLADGRIRDELEGPTAERVAARMAADAAPAAPTR
STGSAVVPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-25 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-19 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-19 42
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_3233 YP_001824745.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-34 53
SGR_3233 YP_001824745.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-40 47
SGR_3233 YP_001824745.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-36 45
SGR_3233 YP_001824745.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-34 43
SGR_3233 YP_001824745.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 3e-24 41
SGR_3233 YP_001824745.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 7e-30 41