Gene Information

Name : SGR_2113 (SGR_2113)
Accession : YP_001823625.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 2510379 - 2511809 bp
Length : 1431 bp
Strand : +
Note : -

DNA sequence :
ATGCGCCGTTCCAAAATCGTCTGCACCCTCGGTCCCGCCGTCGACTCCCATGAGCAGCTCGTCGCTCTGATCGAGGCCGG
CATGAGCGTGGCCCGTTTCAACTTCAGTCACGGCACCCACGAGGAACACCAGGGCCGTTACGACCGCGTCCGCAAGGCGG
CCGCCGAGACTGGCCGCGCGGTGGGCGTGCTCGCCGACCTCCAGGGCCCCAAGATCCGGCTGGCGAAGTTCGCCGAGGGC
CCGGTCGAGCTGGTCCGCGGGGACGAGTTCACCATCACCTCCGAGGACGTCCCCGGCGACAAGTCGATCTGCGGCACGAC
CTACAAGGGTCTGCCCGGCGACGTCGTCAAGGGCGACCCGATCCTGATCAACGACGGCAACGTCGAACTGAAGGTCGTCG
CGGTCGAGGGCCCCCGGGTGAGGACCATCGTCATCGAGGGCGGTGTCATCTCCGACCACAAGGGCATCAACCTGCCCGGC
GCGGCGGTCAACGTCCCGGCCCTGTCCGGGAAGGACGTCGAGGACCTGCGCTTCGCGCTGCGGATGGGCTGCGACCTGGT
CGCCCTCTCCTTCGTCCGCGACGCCGACGACGTCAAGGACGTCCACAAGGTGATGGACGAGGAGGGCCGCCGGGTCCCCG
TCATCGCCAAGGTGGAGAAGCCGCAGGCGGTCGAGCACATGGAGGGCGTCGTCGCGGCGTTCGACGGTGTGATGGTGGCC
CGCGGCGACCTGGCCGTGGAGTATCCGCTGGAGAAGGTCCCGATGGTGCAGAAGCGCCTGGTGGAGCTGTGCCGGCGCAA
CGCCAAGCCGGTGATCGTGGCGACCCAGATGATGGAGTCGATGATCACCAACTCGCGCCCGACCCGCGCCGAGGCGTCCG
ACGTCGCCAACGCGATCCTGGACGGCGCGGACGCGGTCATGCTCTCCGCCGAGTCCTCGGTGGGCGCGTACCCGATCGAG
ACGGTCAAGACGATGGCGAAGATCGTCGTCGCCGCGGAGGAGGAGCTGCTCTCCAAGGGCCTCCAGCCGCTGGTCCCCGG
CAAGAAGCCCCGTACGCAGGGCGGTTCGGTGGCCCGCGCGGCCTGCGAGATCGCGGACTTCCTGGACGGCAAGGCCCTGG
TCGCCTTCACCCAGTCCGGCGACACCGCCCGCCGCCTCTCCCGCTACCGCACGGCCCAGCCGATCCTGGCCTTCACCACG
GACGAGGGCACCCGCAACCAGCTCGCCCTGAGCTGGGGCGTCGAGTCGCACGTGGTCCCGCACGCGGACAACACCGACGC
CATGGTCGACCTGGTCGACGCGGAGCTGCTGAAGCTGAACCGCTACAACGACGGCGACACGATGGTCATCACCGCCGGCT
CGCCCCCCGGCATCCCCGGCACCACCAACATGGTCCGGGTGCACCACCTGGGCGGCGGCGAGCGGGACTGA

Protein sequence :
MRRSKIVCTLGPAVDSHEQLVALIEAGMSVARFNFSHGTHEEHQGRYDRVRKAAAETGRAVGVLADLQGPKIRLAKFAEG
PVELVRGDEFTITSEDVPGDKSICGTTYKGLPGDVVKGDPILINDGNVELKVVAVEGPRVRTIVIEGGVISDHKGINLPG
AAVNVPALSGKDVEDLRFALRMGCDLVALSFVRDADDVKDVHKVMDEEGRRVPVIAKVEKPQAVEHMEGVVAAFDGVMVA
RGDLAVEYPLEKVPMVQKRLVELCRRNAKPVIVATQMMESMITNSRPTRAEASDVANAILDGADAVMLSAESSVGAYPIE
TVKTMAKIVVAAEEELLSKGLQPLVPGKKPRTQGGSVARAACEIADFLDGKALVAFTQSGDTARRLSRYRTAQPILAFTT
DEGTRNQLALSWGVESHVVPHADNTDAMVDLVDAELLKLNRYNDGDTMVITAGSPPGIPGTTNMVRVHHLGGGERD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-78 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-78 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-78 42
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 9e-68 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_2113 YP_001823625.1 pyruvate kinase VFG0479 Protein 5e-79 42