Gene Information

Name : SGR_1951 (SGR_1951)
Accession : YP_001823463.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2306858 - 2307727 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGAGGTCCCAGGACATGGCGACGTATCGACAGGACGACGAAAGGCATGGCCCCCTCGTGGCCGATCACACCCTGGA
AGCCCGGGACGTCCGGCTCGGCTACGGCGAACGCGAGATCGTCCCCGGACTGAGCGTGGCCGTGCCGCCCGGGAGGATCA
CCGTCATCGTGGGCCCCAACGCCTGCGGGAAGTCGACGCTGCTCCGGGCGATGGCCCGGCTGCTGGCGCCCTCCGCCGGG
GCGGTGCTCCTGGACGGCCGGTCCATCCAGGAGATGCCGACGAAGGAGGTCGCCGCCGTGCTCGGCATCCTGCCGCAGAG
CCCGACGGCCCCCGAGGGCATCACCGTCTCCGACCTGGTGGGACGTGGCCGCTACCCGCACCAGGGCTGGTTCCGGCGCT
GGAGCGCGGAGGACGACGAGGCCGTCGCACGGGCCCTGCTGTCGACCGACGTCCTCGAACTCGCCGACCGTTCGGTGGAC
GAGCTGTCCGGCGGCCAGCGGCAGCGGGTGTGGATCGCGATGGCCCTCGCCCAGCGCACGGACATCCTGCTGCTCGACGA
GCCGACGACCTTCCTGGACGCCAGCCACCAGCTGGACGTCCTGGACCTGCTCACCGACCTCAACCGGGAGCGGGGCGTCA
CCATGGTGGCCGTGCTGCACGACCTGAACCTGGCCTGCCGGTACGCGGACCACATGATCGCCATGAAGGCGGGGCGGATC
GTCGCGGAGGGCCGGCCGGTCGACATCGTGACGGAGGAGCTGGTCGGCGAGGTCTTCGGGATGCGCTGCTCGGTGATCGA
GGACCCGGCGTCGGCCACCCCGATGGTCGTGCCGCTGGGCCGCCACCATGTGAGGGACCCGGCCGCCTGA

Protein sequence : 
MKRSQDMATYRQDDERHGPLVADHTLEARDVRLGYGEREIVPGLSVAVPPGRITVIVGPNACGKSTLLRAMARLLAPSAG
AVLLDGRSIQEMPTKEVAAVLGILPQSPTAPEGITVSDLVGRGRYPHQGWFRRWSAEDDEAVARALLSTDVLELADRSVD
ELSGGQRQRVWIAMALAQRTDILLLDEPTTFLDASHQLDVLDLLTDLNRERGVTMVAVLHDLNLACRYADHMIAMKAGRI
VAEGRPVDIVTEELVGEVFGMRCSVIEDPASATPMVVPLGRHHVRDPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-63 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-66 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-66 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-61 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-61 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-61 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-61 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-49 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-52 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_1951 YP_001823463.1 Fe3+-siderophore ABC transporter ATP-binding protein BAC0164 Protein 2e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_1951 YP_001823463.1 Fe3+-siderophore ABC transporter ATP-binding protein VFG0925 Protein 1e-76 58
SGR_1951 YP_001823463.1 Fe3+-siderophore ABC transporter ATP-binding protein VFG1042 Protein 2e-49 44