Gene Information

Name : SGR_1585 (SGR_1585)
Accession : YP_001823097.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Unknown
Product : ABC transporter ATPase/permease
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 1859797 - 1861671 bp
Length : 1875 bp
Strand : +
Note : -

DNA sequence :
ATGGAACAGGACGACGGCCCGCCGCAGGGATCGCGGAGAACTCCCGAACGCGACGCGGAGCCGGGGCGCACACCGGAACC
GGGGCACGCGGCGCAGCAGGCGCAGGCCGCGGGGCCCGTGCGGGAGCGGGACCCGAAAGCCGAGGCGCGGGCCGCGCGGG
CCGCCCTCGCCTCCCTGCTCGCCCCGGTCCGCGTCCGCACCCGGATCGCCATGGCGCTCCAGATCATCGGCGCGGCAGCC
ACCGTCGTCCCGTACATCGCCATCGCCGAGCTGGCCAAGACCCTCCTCGCCCCCGGTCCCGCCGATCCGGACGAGGTGCG
CGCGGCCGTGCTGATCACGGTGGTGGGGCTCTCCGTACGGGCCCTGTCCGGCGGGGTGGCCCTCGCCCTCACGCACTTCG
CGGACGTCGCGCTCCAGGCCTCGCTGCGCCGCCGCATCGTGGCACGGCTGGGGCGCGCCCCGCTCGGCTGGTTCACCGCC
AACTCCTCGGCCACCGTGCGCAAGGCGGCCCAGAACGACGTCCACGACCTGCACTACCTGGTCGCCCACAGTGCCGTGGA
GACCACGGCCGCGGTGACCGTACCGGCCGTGGGGCTCGGCTACCTCTTCTGGCTGGACTGGCGGCTCGCGCTGCTGGCGT
TGGCCACGCTGCCGCTCTACGCCGACGCGTACGCGTACATGATGAGGGACTTCGGCCCGCAGATGGGCCGGCTCAACGCC
GGGATCGCCGCGATCAACAAGGCCATCGTCGAGTTCGTCACGGGCATCGGCGTGGTGAAGACCTTCGGCCGGGCGGGCGA
GGCGCACGCGGGTTACCGGGAGGCCGCGACGCGGTTCGGCGACCACTACAGCGGCTGGGTGCGCCCGATGCTGAAGCTGG
AGGCGTTCGCGTCGATGGCCGTCTCGCCGCCCGTGGTGCTGCTGGTGAATCTGGCGGGCGGCGTCTGGTTCGTGCACCGG
GGCTGGGTCTCCCCCGTCGACGTGCTCACCTCGTCCATGGTGGCCCTGGTCATCCCGAGCGTGCTCGTGACCCTCGGCTT
CGGCGCCCAGGCCCGGCGCGAGGCCTCCGCGGCGGCGGGGCGCATCGCCGCCGTCCTGGACACGCCGGTGCTGCCCGAGG
CCGTCCACCCGAGGCCCCCGGACGGCAACGAAGTCGAGCTGCACGACGTGACGTTCAGCTACGACGGGGCCGTCGACGTC
CTCGACGGGGTGAGCCTGCGCCTGGCGCCGGGGACGGTCACCGCGCTGGTCGGGCCGTCGGGTTCCGGCAAGTCGACGCT
GGCCTCGCTGGCCATCCGCTTCCACGACGTCACCGGCGGACGGATCACCATCGGCGGCGTCGATGTGCGCGAGATCGCCA
CCGAACAGCTCTACCGGCACATCGGCTTCGTCCTCCAGGACGTCCAGTTGCTGCGGACCAGCGTCCGGGACAACATCCGC
CTGGCCCGCCCGGACGCGAGCGAGGAGGAGGTGCGCGAGGCCGCCCGTGCCGCGCGGATCGACCGGCGGATCGAGGAGCT
GCCGCGCGGCTACGACTCCGTCGTCGGCGAGGATGCCGTCCTGTCCGGCGGGGAGGCGCAGCGGGTCTCCATCGCGCGCG
CCCTGCTGGCAGGGGCCCCGGTCCTCGTGCTGGACGAGGCGACGGCCTTCGCCGATCCCGAGTCGGAGGCCGCCATCCAG
GACGCCATCGCCCGGCTGGTGAGGGGCCGCACGGTCCTGGTCATCGCGCACCGGCTCCCGACGATCGTCGAGGCCGACCA
GATCGCCGTCCTGCGCGACGGGCGGATCGTCGAGCGCGGCCGGCACCCGGAACTCCTCGCCGCGGAAGGCCTCTACGCCC
GGATGTGGGCCACGCACGAAAGGGCAGTCGTATGA

Protein sequence :
MEQDDGPPQGSRRTPERDAEPGRTPEPGHAAQQAQAAGPVRERDPKAEARAARAALASLLAPVRVRTRIAMALQIIGAAA
TVVPYIAIAELAKTLLAPGPADPDEVRAAVLITVVGLSVRALSGGVALALTHFADVALQASLRRRIVARLGRAPLGWFTA
NSSATVRKAAQNDVHDLHYLVAHSAVETTAAVTVPAVGLGYLFWLDWRLALLALATLPLYADAYAYMMRDFGPQMGRLNA
GIAAINKAIVEFVTGIGVVKTFGRAGEAHAGYREAATRFGDHYSGWVRPMLKLEAFASMAVSPPVVLLVNLAGGVWFVHR
GWVSPVDVLTSSMVALVIPSVLVTLGFGAQARREASAAAGRIAAVLDTPVLPEAVHPRPPDGNEVELHDVTFSYDGAVDV
LDGVSLRLAPGTVTALVGPSGSGKSTLASLAIRFHDVTGGRITIGGVDVREIATEQLYRHIGFVLQDVQLLRTSVRDNIR
LARPDASEEEVREAARAARIDRRIEELPRGYDSVVGEDAVLSGGEAQRVSIARALLAGAPVLVLDEATAFADPESEAAIQ
DAIARLVRGRTVLVIAHRLPTIVEADQIAVLRDGRIVERGRHPELLAAEGLYARMWATHERAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDPW8_2175 YP_005143723.1 lipid A export ATP-binding/permease protein msbA Not tested Not named Protein 5e-85 45
irp2K YP_005163491.1 lipid A export ATP-binding/permease protein msbA Not tested Not named Protein 2e-82 44
irp2K YP_005134503.1 lipid A export ATP-binding/permease protein msbA Not tested Not named Protein 1e-82 44