Gene Information

Name : SGR_1403 (SGR_1403)
Accession : YP_001822915.1
Strain : Streptomyces griseus NBRC 13350
Genome accession: NC_010572
Putative virulence/resistance : Virulence
Product : iron uptake ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1637461 - 1638300 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCACCGCCGAACCCGACCTGCGGGCCGAGGGCCTGCACCTGGGCTACGACGACCGGGCCGTCGTCAGCGGCCTCGA
CCTGGCCGTGCCGCCGGGCCGGATCACCGCCATCGTCGGCGCCAACGCCTGCGGCAAGTCGACCCTGCTGCGCGCGCTGG
CCCGGCTGCTGGCCCCGCGCGAGGGTGCGGTCAGCCTGGACGGCCGCGCCCTGCACACCATCCCCACCAGGGAGTTGGCC
CAGCGGCTCGGCATCCTCCCGCAGGCGCCGGTCGCCCCCGAGGGCCTCACCGTCATCGACCTGGTCAACCGGGGCCGCTC
CCCGCACCAGACGTGGTGGCGGCAGTGGACCAAGGCCGACGAGCAGGCGGTCCACGACGCGCTCGCCGCCACCGGCACCA
CCGACCTCGCCGACCGCGCGGTCGACGAGCTCTCCGGCGGCCAGCGCCAGCGCGCCTGGATCGCCATGGCCGTCGCCCAG
GGCACCCCGGTCCTCCTCCTCGACGAGCCGACGACGTACCTCGACCTCGCCCACCAGATCGACGTGCTGGACCTCGTCGT
CGACCTCAACCGGCGCGAGGGCCGCACGATCGTCATGGTCCTGCACGACCTCAACCAGGCCTGCCGCTACGCGGATCACG
TCATCGCGATGAAGAAGGGCGGCATCGTCGCCGAGGGCGCCCCCGCCGACGTGATCACCGCCGAGACGGTCGAGGACGTC
TTCGGCCTGCGCTGCCAGGTGACCACGGACCCGGTCAGCCGCACCCCGCTGGTCATCCCGGTCGGCCGTCACCACACGCC
GGGGCCCGAGCCCGACAAGCCCGCCGGGAGCCTCGGCTGA

Protein sequence : 
MSTAEPDLRAEGLHLGYDDRAVVSGLDLAVPPGRITAIVGANACGKSTLLRALARLLAPREGAVSLDGRALHTIPTRELA
QRLGILPQAPVAPEGLTVIDLVNRGRSPHQTWWRQWTKADEQAVHDALAATGTTDLADRAVDELSGGQRQRAWIAMAVAQ
GTPVLLLDEPTTYLDLAHQIDVLDLVVDLNRREGRTIVMVLHDLNQACRYADHVIAMKKGGIVAEGAPADVITAETVEDV
FGLRCQVTTDPVSRTPLVIPVGRHHTPGPEPDKPAGSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-59 54
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-52 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-52 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-52 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-52 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-47 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-56 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-56 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-46 46
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-27 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_1403 YP_001822915.1 iron uptake ABC transporter ATP-binding protein BAC0164 Protein 6e-47 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGR_1403 YP_001822915.1 iron uptake ABC transporter ATP-binding protein VFG0925 Protein 2e-60 55
SGR_1403 YP_001822915.1 iron uptake ABC transporter ATP-binding protein VFG1042 Protein 5e-47 46