Gene Information

Name : Oter_0073 (Oter_0073)
Accession : YP_001816964.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 85372 - 86085 bp
Length : 714 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_2019 probable ATP-binding component of ABC transporter

DNA sequence :
ATGCCCATGAGTGACCAGACGATGCTGAAAGTCGAGCGGCTCACAAAAACATATCCGACCGCGGCGGGGCCGCTCACCGT
GTTGCACGAGGTGAGTTTCGAGGTGCCGGCAGGCGCGAGCGTGGCGATCGTGGGCCCGAGCGGCAGTGGCAAGACGACGC
TGCTCGGTCTGTGCGCGGGCCTCGATCAGCCCAGCGGCGGCAGCGTGGTGCTGGCCGGCGCGTCGATCGCCGCGTTGGAC
GAGGATGCGCGGGCGCGCGTGCGGAATCAGCATGTCGGATTCGTGTTTCAAAATTTCCAGCTGGTGCCGACGCTGACCGC
GCTGGAAAACGTGCTGGTGCCGGTCGAGCTGCGCGGCGAGTCGGGCTGCGAGCCGGAGGCGCGCGAATTACTGGCGCGCG
TCGGGCTCGGCGAGCGTTGCGAGCATTATCCGGTGCAACTTTCGGGCGGCGAGCAGCAGCGCGTGGCCTTGGCACGGGCG
TTCATGAACCGGCCGAAAATATTATTCTGCGACGAACCGACGGGCAATCTGGACGGCGACACTGCGCACGCGATGGTGGA
GCTGATTTTCGGGCTGAACCGCGAACGCGGCACGACGCTGGTGCTGGTGACGCACGACCTCGAACTGGCGCGCCGCTGTC
ACCGGATCCTCCGCCTCCGCACCGGCGCCGTCGTCAGCGATGAGATGGTCACTGCCCGCGAATCTCGCGAATAG

Protein sequence :
MPMSDQTMLKVERLTKTYPTAAGPLTVLHEVSFEVPAGASVAIVGPSGSGKTTLLGLCAGLDQPSGGSVVLAGASIAALD
EDARARVRNQHVGFVFQNFQLVPTLTALENVLVPVELRGESGCEPEARELLARVGLGERCEHYPVQLSGGEQQRVALARA
FMNRPKILFCDEPTGNLDGDTAHAMVELIFGLNRERGTTLVLVTHDLELARRCHRILRLRTGAVVSDEMVTARESRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_0073 YP_001816964.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-34 45
Oter_0073 YP_001816964.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-39 42