Gene Information

Name : Oter_4210 (Oter_4210)
Accession : YP_001821083.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 5436051 - 5436833 bp
Length : 783 bp
Strand : +
Note : KEGG: bpu:BPUM_2491 tRNA nucleotidyltransferase; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGGCCCTCGCCCGTGTCGCCGCTACGGTCGGCCCCATGCCTTCCCCGCGCTCCGACGGTCGCCATCCCGATCAGCTTCG
CCCCATCACGTTCGAAGCGAACATCGCGCCCTACGCCACCGGCTCGGTGCTGGTGTCCTTCGGCTCCACGCGCGTGATCT
GCGCCGCAATGATCGAGCCCAAGGTCCCGCTGTGGATGCGTCAGCAGGGCGTCCGGGGCGGCTGGCTCACCGCCGAGTAT
TCGATGCTCCCGTACTCGACCCTCGACCGCAAACCGCGCGACATCAGCAAGGGCAAGCTCGACGGGCGCACCGTCGAAAT
CCAGCGGCTCATCGGTCGTTCGCTGCGCGCCGTGGTCGATCTGATGAAGCTCGGCGAAAACACGCTGTGGATCGACTGCG
ACGTGCTGCAGGCCGACGGCGGCACGCGCACCGCTTCCATCACCGGCGCCTACCTCGCCACCCGGCTCGCGGTCCAGCGG
CTCGTCGACGCCGGCAAGCTCGCGGAAAATCCCGTGCTCGATTCCGTCGCCGCCGTTTCTGCCGGGGTCTGCGGCGGACA
GGAGCTGCTCGATTTGAACTACGTCGAGGACAAGGACGCGGAGGTCGACGCTAACATCGTGATGACCGGCCGCGGTCAGT
TTGTGGAGATGCAGAGCTCGGGCGAGGAAGCGACGTTCACCCACGAGCAGCTGCTCAGCCTCACTGCGCTCGCCCAAAAA
GGCCTGAAGGAAATCGCCGCGCTGCAGACCGCGTTCCTGACCAAGTGCCTGCTCGCGCGGTAG

Protein sequence :
MALARVAATVGPMPSPRSDGRHPDQLRPITFEANIAPYATGSVLVSFGSTRVICAAMIEPKVPLWMRQQGVRGGWLTAEY
SMLPYSTLDRKPRDISKGKLDGRTVEIQRLIGRSLRAVVDLMKLGENTLWIDCDVLQADGGTRTASITGAYLATRLAVQR
LVDAGKLAENPVLDSVAAVSAGVCGGQELLDLNYVEDKDAEVDANIVMTGRGQFVEMQSSGEEATFTHEQLLSLTALAQK
GLKEIAALQTAFLTKCLLAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-51 51