Gene Information

Name : Oter_0419 (Oter_0419)
Accession : YP_001817309.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 495846 - 497171 bp
Length : 1326 bp
Strand : -
Note : KEGG: pth:PTH_2085 flagellar biosynthesis/type III secretory pathway ATPase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPas

DNA sequence :
ATGTCCACCCTGTCGATTGCCCCGCTGGTCGAGACGCTCCGCACGCAAGTGCGGCATCTCCCGCCCGTGCAACGACTGGG
GGCGGTTACCGGCGTGGCGGGGCTGATCATCGAATCGGATGGCCCCAATGTCGGGCTTGGCGAGCTCTGCCTCGTGCGCT
CACCGCGTTCGGAGTTCACGGTGCGCGCGGAAGTCGTCGGCTTCCGTGAACACCGCGTGCTGCTCATGCCGCTTGGCGAT
GCGACGGGCCTGCACGTCGGCTGCGAGGTGGCGGCCTGTGATCGCCCGCCGCTGCCGAAGCCGGGCCCGGAGATGCTCGG
CCGCGTGCTCGATGCGCTGGGTCGTCCGTACGACGGCTTGGGCATGCTCCCGGTCGATCGCTCCGTGGGTCGCGATGCCA
CGCCGCCGCACCCGCTGCGACGCCAGCGGATTCATCATTCGTTTCAGACCGGCGTCCGCGCGCTCGACGCGTTCACGCCC
TTCGGCCGCGGCCAGCGCCTCGGCCTTTTCGCCGGCTCCGGCGTCGGCAAATCCACGCTCATGGGCATGATCGCCCGCGG
CTCGGAAGCCGACGTGGTGGTGGTGGCGCTGGTGGGCGAACGTGGTCGCGAGGTGCGCGAGTTCATCGAAAAAGATCTCG
GGCCCGAAGGCTTGAAGCGGGCCATCGTCGTCGTGGCGACGTCCGATACGCCGGCGCCGCTGCGGTTGCGCGCGGCCTTC
ACGGCCACGGCCATCGCCGAAGCCTGGCGCGCCGAGGGCAAGAACGTCCTGTTCATGATGGACTCGGTCACGCGGTTTGC
GATGGCGCAACGCGAGATCGGCCTGGCCGTGGGCGAACCCGCCGCGACGCGGGGCTACACGCCCTCGGTGTTTGCGTTGT
TGCCGCGGCTGCTGGAGCGAACGGGTGCGGGCGAATTGGGCGCGATCACCGCGCTCTACACCGTGCTCGTCGAAGGCGAC
GACATGAACGAGCCGGTGGCCGACGCCGTGCGCGGTATTCTCGACGGCCACGTGGTGCTGTCCCGCGCGCTGGCGCATTT
CAACCACTATCCCGCCATCGACGTGCTCGAAAGCGTTAGCCGGTTGATCCGCGACGTGTGCACGCCGGACGAGGTGGCAC
TGGCCGCGAAAGCGCGGGAGCATCTCGCGCTGTATCGCAAGAACGAGGATCTCATTTCCATCGGTGCCTATCAAAAGGGC
GCCAACGCCGCGCTCGACCGCGCCATCGCCCTCCACGAACCGCTGCGCGGGTTTCTGCGCCAGCCGATCGAGGAGCACAC
GCCGCGGGAGCAGAGCTTTCAACTCCTGAAGAAAATTCTCACATGA

Protein sequence :
MSTLSIAPLVETLRTQVRHLPPVQRLGAVTGVAGLIIESDGPNVGLGELCLVRSPRSEFTVRAEVVGFREHRVLLMPLGD
ATGLHVGCEVAACDRPPLPKPGPEMLGRVLDALGRPYDGLGMLPVDRSVGRDATPPHPLRRQRIHHSFQTGVRALDAFTP
FGRGQRLGLFAGSGVGKSTLMGMIARGSEADVVVVALVGERGREVREFIEKDLGPEGLKRAIVVVATSDTPAPLRLRAAF
TATAIAEAWRAEGKNVLFMMDSVTRFAMAQREIGLAVGEPAATRGYTPSVFALLPRLLERTGAGELGAITALYTVLVEGD
DMNEPVADAVRGILDGHVVLSRALAHFNHYPAIDVLESVSRLIRDVCTPDEVALAAKAREHLALYRKNEDLISIGAYQKG
ANAALDRAIALHEPLRGFLRQPIEEHTPREQSFQLLKKILT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-87 52
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-86 50
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-86 50
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-83 50
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-83 50
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-85 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-85 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-84 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-85 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-85 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-73 49
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-73 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-73 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-73 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-73 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-69 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-69 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-68 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-68 48
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-70 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-69 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-69 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-69 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-66 45
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-65 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-66 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-66 45
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-66 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 8e-66 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 8e-66 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-69 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-66 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-65 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-65 44
escN AAC31513.1 L0034 Virulence LEE Protein 2e-65 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-65 44
escN AAK26715.1 EscN Virulence LEE Protein 2e-66 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-65 44
escN AAL57542.1 EscN Virulence LEE Protein 2e-66 44
escN AAC38383.1 EscN Virulence LEE Protein 1e-65 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-66 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-66 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-66 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-57 41
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-58 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 9e-58 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-58 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-90 52
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-86 51
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG2144 Protein 6e-88 51
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-83 49
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-73 49
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-77 49
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG2499 Protein 6e-78 48
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-77 46
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG0730 Protein 6e-66 44
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG0812 Protein 9e-66 44
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG2459 Protein 1e-57 42
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG0555 Protein 4e-58 41
Oter_0419 YP_001817309.1 flagellar protein export ATPase FliI VFG1778 Protein 3e-54 41