Gene Information

Name : Oter_3805 (Oter_3805)
Accession : YP_001820680.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 4943675 - 4945663 bp
Length : 1989 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: scl:sce3987 hypothetical protein

DNA sequence :
ATGCCGCTCCAAACTCCCCTTCTCGCCAAGGCTGCCAATCAGGCGCGTGGACTCGCCATCGACGCGGTGCACGCGTGCTC
GTCGGGCCACCTCGGGCTCCCGCTCGGAGCCGCCGAAATCGGCGCCGTGCTTTACGGCCATGCGCTGGTGCACAACCCGG
AGCATCCGCGCTGGCTCAACCGCGATCGTTTCGTTCTCTCCGCCGGCCACGGCAGCATGTTCCTCTACGCGTGGCTGCAC
CTGAGCGGCTACGACATCCCGCTGGACGAGGTGAAGAAGTTCCGCGCGTTGCACAGCATCACGCCGGGGCACCCGGAATT
CCGCGAGACGCCCGGCGTCGAGGCGACGACCGGCCCGCTGGGGCAGGGGGTGGGCAACGCGGTCGGCATGGCGGTCGCCG
GCCAGATGGCGGCGGCGCGGTTCAACACGCCCGAGCACACGGTTTTCGACTATCATGTCGTTTGCCTCGCGGGCGACGGC
TGCATGCAGGAAGGCGTGGCGATGGAGGCCGTGGCGTTCGCCGGGCACCAGAAGCTCGACAACCTGATCCTGATTTACGA
CTCGAACGACGTGACGCTCGACGCGATGGCGGTGAAGACGCAGAGCGAGAACGCCGCCGCGCGCTTCAAGGCCATCGGCT
GGGACGTGCAGACGATCGACGGCCACGACATGGCGGTGTTCCTGAAGGCCTTCAACAAGGCCAAGAAGGCAACGAGTGGA
AAACCGCAGCTGATCATCGCGAAGACGCAGATCGCGCGCGGCATCCCGGAAGTCGCCGGCACGGCCAAGGGCCATGGCGA
GGGCGGGGCAAAGTTCGCCGACAGCGCGCGCGCCGGACTTGGCTTGCCGGCCGACCAGCACTTCTTCGTGAGCGACGACG
TCCGCGCCTATTTCGCGGATCATCTGAAACGACTGCTCCGCCACTACAAGAAGTGGGAAAAGACGTTTGAGGCGTGGCGC
ACCGCTAATCCGGACAAGGCCGCGCTGCTCGACTCCGCGAAGAACGCGCCGAACGCGAGCGCACTGCTCGCGAAGATCCC
GGCGTTCCCGGCCGACGCCAAGCTCGCCACGCGCGCGGCGGGACGCGACGTGCTGCAGCCCGTCGCCGCGGAACTGCCGC
TGCTGATCGGCGGCAGCGCCGACCTCTACGGCTCGACGTTGAACCTCATCGCGGCGGACAAGGACTTTGACCCGAGCAAT
CGCGGCGGCCGGAATATTCGCTTCGGCATTCGCGAGCACGGCATGGCCGCGATCGCGAACGGCATCGCTTACGACGGGCT
CTTCCGTCCGAGCGTGGCGACGTTCCTCGTGTTTGCCGACTACTCGCGTCCGCCGATGCGGCTCGCGGCGCTATCGGATC
TGCCCGTCGTCTACATCTACACGCACGACTCGATCGGCGTCGGCGAAGACGGCCCGACGCACCAGCCGGTGGAGACGGTC
TCAGCGCTGCGCGTGATTCCGAACATGGATGTGATCCGTCCGGCGGATCCGGAGGAAACCGCCGGCGCGTTTGCTGCGGC
GCTCGAACGGACGGATGGGCCGACGCTGCTGGCGCTCACGCGTCAGGCGCTGCCGATGCTGAACGACATTCCGGTGCAGA
CGCGCCGCGAAGGCGTGCTCAAGGGCGGCTACGTGGCGAAGCAGGAAACGGCGGCGCTCACCCACATCCTCATCGCGACG
GGCAGCGAACTGCAGATCGCGCTCGCCGCGGCCAAGACGCTCGGTGCCGGCGTGCGCGTCGTGTCGCTGCCGTCGTTCCA
GCGATTTGACCAGCAGTCGCCGGAGTATCGCGAGAGCGTGCTGCCCGCCAGCTGCCGGAAGCGTGTCGCGGTCGAGGCGG
GTGTGCCGGACCTCTGGTATAAATACGTCGGCCTCGAGGGTAAGGTGGTGGGCATCGCCCGCTTTGGCCTGAGCGCTCCT
GGGCCGGTCGTGTTCAAGGAACTCGGCATCACCGCCGAAGCCGTCGTCGCTGCCGCTCAGTCGCTGTAA

Protein sequence :
MPLQTPLLAKAANQARGLAIDAVHACSSGHLGLPLGAAEIGAVLYGHALVHNPEHPRWLNRDRFVLSAGHGSMFLYAWLH
LSGYDIPLDEVKKFRALHSITPGHPEFRETPGVEATTGPLGQGVGNAVGMAVAGQMAAARFNTPEHTVFDYHVVCLAGDG
CMQEGVAMEAVAFAGHQKLDNLILIYDSNDVTLDAMAVKTQSENAAARFKAIGWDVQTIDGHDMAVFLKAFNKAKKATSG
KPQLIIAKTQIARGIPEVAGTAKGHGEGGAKFADSARAGLGLPADQHFFVSDDVRAYFADHLKRLLRHYKKWEKTFEAWR
TANPDKAALLDSAKNAPNASALLAKIPAFPADAKLATRAAGRDVLQPVAAELPLLIGGSADLYGSTLNLIAADKDFDPSN
RGGRNIRFGIREHGMAAIANGIAYDGLFRPSVATFLVFADYSRPPMRLAALSDLPVVYIYTHDSIGVGEDGPTHQPVETV
SALRVIPNMDVIRPADPEETAGAFAAALERTDGPTLLALTRQALPMLNDIPVQTRREGVLKGGYVAKQETAALTHILIAT
GSELQIALAAAKTLGAGVRVVSLPSFQRFDQQSPEYRESVLPASCRKRVAVEAGVPDLWYKYVGLEGKVVGIARFGLSAP
GPVVFKELGITAEAVVAAAQSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-104 44
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-103 44