Gene Information

Name : Oter_0024 (Oter_0024)
Accession : YP_001816916.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 28575 - 29240 bp
Length : 666 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6478 ABC transporter related

DNA sequence : 
ATGATCTCTCTTCGCAACGTCAATCGCGTCTATCCCCTCAAAGGCGGCCCGTTCTACGCCCTTCGCGACATCAACCTCGA
TATTCAGGAAGGCGATTTCCTTTCCATCATGGGCCCGTCGGGTTCGGGCAAGTCGACGCTGCTCCACATCCTCGGACTTC
ACGACAGCGCTTGGGACGGCGAGTATTACCTGCTCGGCGAACCCGTCCACAAGCTGGACAAGAAAAAGCGCTTTGACCTG
CAGAAGAAACACATCGGGTTCGTGTTTCAGAGCTACCATCTCCTCGACGATCTCACCGTCTACGAAAACCTCGAGATCCC
GCTGTCCTATCGCGACACGCCGAAGAAGGACCGCGACAGCATCGTCTGCGATGCGCTCGATCGCTTCCACATCGTCGGCA
AGAAAGACCTGTATCCGAACCAGCTTTCCGGCGGACAACAGCAGCTCGTCGGCGTCGCCCGCGCGCTGGTCGCCAAGCCG
GCGCTGATCCTCGCCGACGAGCCGACGGGCAATCTCCACTCCGACCAGGGCCGCGAAATCATGCAGCTGTTCAAGAAGCT
CAACCAGGAGAACGGCGTCACCATCGTCCAGGTCACGCATTCGGTGGAAAACGCTTCCTACGGCAGCCGGGTCGTGCGGC
TCGCCGACGGCATGATCGTGAAGTGA

Protein sequence : 
MISLRNVNRVYPLKGGPFYALRDINLDIQEGDFLSIMGPSGSGKSTLLHILGLHDSAWDGEYYLLGEPVHKLDKKKRFDL
QKKHIGFVFQSYHLLDDLTVYENLEIPLSYRDTPKKDRDSIVCDALDRFHIVGKKDLYPNQLSGGQQQLVGVARALVAKP
ALILADEPTGNLHSDQGREIMQLFKKLNQENGVTIVQVTHSVENASYGSRVVRLADGMIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_0024 YP_001816916.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-38 45
Oter_0024 YP_001816916.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-31 42
Oter_0024 YP_001816916.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-25 41