Gene Information

Name : Oter_1900 (Oter_1900)
Accession : YP_001818783.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2386502 - 2387206 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6481 ABC transporter related

DNA sequence : 
ATGCCCGAGTCTCTCATCCACCTCGAAGGTGTCACCAAAGTCTTCCTCACCGATGAGGTCGAAACGCACGCGCTGTCCGG
CATTCACATGGACATCGTCAAGGGCGAATACGTTTCGATCGCCGGCCCCTCGGGCTGCGGCAAGTCCACGCTGCTCTCGA
TCCTGGGTCTGCTCGATTCGCCCACGGAGGGTTCCTACATTCTCAACGGCCGCCCCGTGCAGGGCCTCTCGCTTCCGGAG
CGCGCGCGCATCCGCAACCGCGAGATCGGATTCATTTTCCAGTCGTTCAACCTCATTGGCGACCTGACCGTCTACGAGAA
CGTCGAACTGCCGCTCACCTATCGCGGCATGCCCGCCGCGGAGCGCAAGACCGCCGCGATGGAAGCGCTCGAGAAGGTGG
GCATGGGCCACCGCGCCAAGCACCTCCCGTCCCAGCTCTCCGGCGGTCAACAGCAGCGTGTCGCCGTCGCCCGCGCGCTC
GCCGGCAAACCCGCCGTCCTCCTCGCCGACGAACCGACCGGTAACCTTGATTCGAAAAACGGCGACTCGGTCATGCAGCT
CCTCGCCGAGCTCCACAAGGCCGGCGCGACCATCGTCATGGTCACGCACGACGTCCGCTTCGCCCGCCACGCCGACCGCA
CCGTCCATATCTTCGACGGCCGCGTCGTGCAGGAGCAGATGGAGTCCGATCCGACGCGCGCCTGA

Protein sequence : 
MPESLIHLEGVTKVFLTDEVETHALSGIHMDIVKGEYVSIAGPSGCGKSTLLSILGLLDSPTEGSYILNGRPVQGLSLPE
RARIRNREIGFIFQSFNLIGDLTVYENVELPLTYRGMPAAERKTAAMEALEKVGMGHRAKHLPSQLSGGQQQRVAVARAL
AGKPAVLLADEPTGNLDSKNGDSVMQLLAELHKAGATIVMVTHDVRFARHADRTVHIFDGRVVQEQMESDPTRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_1900 YP_001818783.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-37 49
Oter_1900 YP_001818783.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-47 48
Oter_1900 YP_001818783.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-30 47
Oter_1900 YP_001818783.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_1900 YP_001818783.1 ABC transporter-like protein VFG0869 Protein 1e-17 42
Oter_1900 YP_001818783.1 ABC transporter-like protein VFG2059 Protein 1e-12 42