Gene Information

Name : Oter_1614 (Oter_1614)
Accession : YP_001818498.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1983014 - 1983694 bp
Length : 681 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: net:Neut_0040 two component heavy metal response transcriptional regulator, winged helix family protein

DNA sequence : 
ATGCGTATTCTCGTCATTGAGGATGAAGCCCAACTGGCGCGGCACATCGTGCGCGCGCTCACGCGGCACGGCCACGTTGC
GAGCGCGGAGCTCGACGGCGAAAAGGGCCTGCAGTCCGTGCTGCGCGACCCACCCGATTTGGTCGTGCTCGATCTGAACC
TGCCGGGCGTCGATGGCTTGGCGGTACTCGCGCGGCTGCGCGAAGCCAATTCGCCGGCCCGCGTGCTGATCCTGACGGCG
CGCAGCGAAGTGGAACACCGCGTCAAGGGCCTCAAGGCGGGCGCCGACGACTATCTGCCGAAACCCTTTTCCCTCGATGA
GCTCGTCGCGCGCATCGAGGCGCTGGGCCGGCGCGGGGCTACTCCCACGGCGGCGGATTTTCTTAAGGTGGCCGATCTGC
AGATGGACGTGCAGCACCGCCGCGTGAGCCGTGCCGCGCGGCCGGTGGCACTCTCGCCCCGCGAATTCGACGTCCTGCAG
GTGCTGATGCAGGAGCCGGGTCGCGTGTTTTCCCGCACGGAACTGTGCGAACGGGTCTGGCAACGCGATCATCAGTACGA
CACGCGCACGGTCGAAATCTTCATCGCGCGACTGCGCAAGAAGGTGGACTCCGGTTTCAACGCTCCGCTGATTCACACCC
TCCGTTCGATCGGCTACACCATCCGGGGGCCCGTGGCATGA

Protein sequence : 
MRILVIEDEAQLARHIVRALTRHGHVASAELDGEKGLQSVLRDPPDLVVLDLNLPGVDGLAVLARLREANSPARVLILTA
RSEVEHRVKGLKAGADDYLPKPFSLDELVARIEALGRRGATPTAADFLKVADLQMDVQHRRVSRAARPVALSPREFDVLQ
VLMQEPGRVFSRTELCERVWQRDHQYDTRTVEIFIARLRKKVDSGFNAPLIHTLRSIGYTIRGPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_1614 YP_001818498.1 two component transcriptional regulator BAC0197 Protein 5e-34 43
Oter_1614 YP_001818498.1 two component transcriptional regulator BAC0125 Protein 3e-31 42
Oter_1614 YP_001818498.1 two component transcriptional regulator BAC0083 Protein 6e-34 41
Oter_1614 YP_001818498.1 two component transcriptional regulator BAC0638 Protein 8e-30 41
Oter_1614 YP_001818498.1 two component transcriptional regulator AE000516.2.gene3505. Protein 1e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_1614 YP_001818498.1 two component transcriptional regulator VFG1389 Protein 5e-30 42
Oter_1614 YP_001818498.1 two component transcriptional regulator VFG0596 Protein 4e-27 41