Gene Information

Name : Oter_1561 (Oter_1561)
Accession : YP_001818445.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1934650 - 1936086 bp
Length : 1437 bp
Strand : -
Note : KEGG: rba:RB10277 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence :
ATGAACGTCACTCCCGACGCGTTTCGCCGCACCAAGATCATCTTCACCCTCGGCCCGGCCACCGAGAGCGAAGCCATGCT
CGAAAAGATGATCGTCGGCGGCGCCGATATCGTCCGGCTCAACATGGCCCACGCCTCCCACGAGTGGACGCGCACCATCG
TCCGCCGGATCCGCGCGATCAGCACCCGCGTGAACCGCGAGGTCGCGCTCCTGATGGACATCAAGGGCCCCGAGATCCGG
ACCGGCGACCTGCCCAGCCCGATCCAGCTGAAACCCGGCGAGATCTTCGACTTCACCGTGCATCCGAGCACGTCGCGCGA
GTCCGATCAGGAGGTGCGCTCCGTCGACGTCAACTACCGCGATCTCGTCAACGACATCCAGATTGGCGACACCGTGCTCG
TCGACAACGGGCTGATCCGCCTCGAGGTCCTCGCAAAGGACCAGGCGCACATCCGCTGTCGCGTGCTCATCCCCGGCCAG
CTCAGCTCCCGCCGGCACATCAATCTCCCGGGCGTGCGGATCAACCTGCCGGCCTTCACCGAGAAAGACCGCGTCGACAC
GAGCCTCGGCATCGCCGAAGGCGTCGACTTCATCGCGCTGTCGTTCGTGCGCGAGGCCAAGGACGTGAACGATCTCCGCA
CCTTCCTGCACGAGCATGGCTCGAAGGCGCGCATTATCGCCAAGATCGAGGACCAGTCCGCGATCAGCAATCTCGACGAG
ATCATCGAGGCCTGCGACGGGCTGATGATCGCGCGCGGCGATCTCGGCATCGAGTGTCCATTCGAGGATCTGCCGGTCAT
CCAGCGCCGCGCCGTTCGCGCCTGCATCGCCAAGGGTCGTCCCGTGATCGTCGCCACCCACATGCTGGAGTCGATGATCA
GCCAGCCCGTGCCCACCCGCGCCGAGATCACCGACGTCGCCAACGCCGCCTACGAGCGCGCCGACTGCGTGATGCTCTCG
GGCGAAACCACCGTCGGCAAATACCCCCTCGAGTGCCTGCAGATGCTCGACAAGATCGCCCGGCGGATCGAAGCCGAGAT
GGACCCCGATCATCAGGAGCCGCTGAATTTCTCGACGGAGAAGATGAAGATCCTCCACTCCGCCGTCGTACTCGCGAACG
AGATTCCCGGCTCGAAAATTCTTACCTTCACGCGTTACGGCTACATGGCCCAAGGCCTCGCGGCGCTGCGCCCCACGTGC
GCGGCCGTCTACGCCTTCACGCCGACCATCGAGGTGCTGCGCCAGATGCGGCTGCTGCGCTCGGTCGAGCCGTTCCTGAT
GCCGTTCGCCGCCAAGCCGGATGCCACGATCGAGAACGCGATCGAGATGTTGCGCCAGGCCGGCCGGATCAAGCCGGGCG
ACAAGCTGATCGTCGCCACCGACATTCTCGCCGCCGACCGGCTCGTGGACGCCGTCCAACTCCGCACCGTGCGGTAG

Protein sequence :
MNVTPDAFRRTKIIFTLGPATESEAMLEKMIVGGADIVRLNMAHASHEWTRTIVRRIRAISTRVNREVALLMDIKGPEIR
TGDLPSPIQLKPGEIFDFTVHPSTSRESDQEVRSVDVNYRDLVNDIQIGDTVLVDNGLIRLEVLAKDQAHIRCRVLIPGQ
LSSRRHINLPGVRINLPAFTEKDRVDTSLGIAEGVDFIALSFVREAKDVNDLRTFLHEHGSKARIIAKIEDQSAISNLDE
IIEACDGLMIARGDLGIECPFEDLPVIQRRAVRACIAKGRPVIVATHMLESMISQPVPTRAEITDVANAAYERADCVMLS
GETTVGKYPLECLQMLDKIARRIEAEMDPDHQEPLNFSTEKMKILHSAVVLANEIPGSKILTFTRYGYMAQGLAALRPTC
AAVYAFTPTIEVLRQMRLLRSVEPFLMPFAAKPDATIENAIEMLRQAGRIKPGDKLIVATDILAADRLVDAVQLRTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-68 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-67 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-68 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-68 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_1561 YP_001818445.1 pyruvate kinase VFG0479 Protein 1e-68 43